Page Banner

United States Department of Agriculture

Agricultural Research Service

Research Project: ENZYMATIC PROCESSES FOR INCREASING INDUSTRIAL UTILIZATION OF VEGETABLE OILS

Location: Commodity Utilization Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Expression of a lipid-inducible, self-regulating form of Yarrowia lipolytica lipase LIP2 in Saccharomyces cerevisiae - (Peer Reviewed Journal)
Shockey, J., Chapital, D., Gidda, S., Mason, C., Davis, G., Klasson, K.T., Cao, H., Mullen, R., Dyer, J. 2011. Expression of a lipid-inducible, self-regulating form of Yarrowia lipolytica lipase LIP2 in Saccharomyces cerevisiae. Applied Microbiology and Biotechnology. 92(6):1207-1217.
Temperature-sensitive, Post-translational Regulation of Plant Omega-3 Fatty-acid Desaturases is Mediated by the Endoplasmic Reticulum-associated Degradation Pathway - (Peer Reviewed Journal)
O'Quin, J.B., Bourassa, L., Zhang, D., Shockey, J.M., Gidda, S.K., Fosnot, S., Chapman, K.D., Mullen, R.T., Dyer, J.M. 2010. Temperature-sensitive, Post-translational Regulation of Plant Omega-3 Fatty-acid Desaturases is Mediated by the Endoplasmic Reticulum-associated Degradation Pathway. Journal of Biological Chemistry. 285(28):21781-21796.
Feasibility of dibromochloropropane (DBCP) and trichloroethylene (TCE) adsorption onto activated carbons made from nut shells of different almond varieties     Reprint Icon - (Peer Reviewed Journal)
Klasson, K.T., Ledbetter, C.A., Wartelle, L.H., Lingle, S.E. 2010. Feasibility of dibromochloropropane (DBCP) and trichloroethylene (TCE) adsorption onto activated carbons made from nut shells of different almond varieties. Industrial Crops and Products. 31:261-265.
Potential Targets for Seed Improvement through Bioengineering Starch Synthesis Pathways - (Abstract Only)
Cao, F., Cao, H. 2009. Potential targets for seed improvement through bioengineering starch synthesis pathways (abstract). Plant Biology 2009, July 18-22, Honolulu, Hawaii.
Arabidopsis thaliana GPAT8 and GPAT9 are localized to the ER and possess distinct ER retrieval signals: Functional divergence of the dilysine ER retrieval motif in plant cells - (Peer Reviewed Journal)
Gidda, S.K., Shockey, J.M., Rothstein, S.J., Dyer, J.M., Mullen, R.T. 2009. Arabidopsis thaliana GPAT8 and GPAT9 are localized to the ER and possess distinct ER retrieval signals: Functional divergence of the dilysine ER retrieval motif in plant cells. Plant Physiology and Biochemistry. 47(10):867-879.
Engineering industrial oil biosynthesis: cloning and characterization of Kennedy pathway acyltransferases from novel oilseed species - (Book / Chapter)
Shockey, J.M. 2009. Engineering industrial oil biosynthesis: cloning and characterization of Kennedy pathway acyltransferases from novel oilseed species. In: Hou, T.H., Shaw, J.-F., editors. Biocatalysis and Agricultural Biotechnology. Abingdon, England:CRC Press. pp. 19-31.
Metabolic engineering of hydroxy fatty acid production in plants: rcdgat2 drives dramatic increases in ricinoleate levels in seed oil     Reprint Icon - (Peer Reviewed Journal)
Burgal, J., Shockey, J., Lu, C., Dyer, J., Larson, T., Graham, I., Browse, J. 2008. Metabolic engineering of hydroxy fatty acid production in plants: rcdgat2 drives dramatic increases in ricinoleate levels in seed oil. Plant Biotechnology Journal. 6(8):819-831.
Role of the fatty acid breakdown pathway in the leaf - (Abstract Only)
Siocombe, S., Cornah, J., Pinfield-Wells, H., Dyer, J.M., Graham, I.A. Role of the fatty acid breakdown pathway in the leaf (abstract). International Symposium on Plant Lipids.
Construction of Spline Functions in Spreadsheets to Smooth Experimental Data     Reprint Icon - (Peer Reviewed Journal)
Klasson, K.T. 2008. Construction of spline functions in spreadsheets to smooth experimental data. Advances in Engineering Software. 39:422-429.
The carboxyl-terminus of cytochrome b5 confers endoplasmic reticulum specificity by preventing spontaneous insertion into membranes - (Abstract Only)
Henderson, M.P., Andrews, D.W., Hwang, Y.T., Mullen, R.T., Dyer, J.M. 2006. The carboxyl-terminus of cytochrome b5 confers endoplasmic reticulum specificity by preventing spontaneous insertion into membranes (abstract). Biochemistry and Cell Biology 84(6):1084-1084.
Remediation of groundwater contaminated with radioactive compounds - (Book / Chapter)
Klasson, K.T., Taylor, P.A. 2006. Remediation of groundwater contaminated with radioactive compounds. On line web access only at www.eolss.net.
Calculation of rates for enzyme and microbial kinetics via a spline technique     Reprint Icon - (Book / Chapter)
Klasson, K.T. 2007. Calculation of rates for enzyme and microbial kinetics via a spline technique. In: Hou, C.T., Shaw, J., editors. Biocatalysis and Biotechnology for Functional Foods and Industrial Products. Boca Raton, Fl: CRC Press. p. 495-504.
Foundation Paper for the Plant Oil Flagship - (Proceedings)
Stymne, S., Dyer, J.M., Carlsson, A. 2006. FOUNDATION PAPER FOR THE PLANT OIL FLAGSHIP. In: Proceedings of the Pre-Conference Introductory Papers. EPOBIO Workshop: Products from Plants--the Biorefinery Future. 15pp.
Plant Fatty Acid (Ethanol) Amide Hydrolases - (Peer Reviewed Journal)
Shrestha, R., Kim, S., Dyer, J.M., Dixon, R.A., Chapman, K.D. 2006. Plant fatty acid (ethanol) amide hydrolases. Biochimica et Biophysica Acta. 1761(3):324-334.
Biomodification of coal to remove mercury - (Peer Reviewed Journal)
Klasson, K.T., Borole, A.P., Mckeown, C.K., Hamilton, C.Y. 2006. Biomodification of coal to remove mercury. Applied Biochemistry and Biotechnology. 129-132:897-908.
Methane Production in a 100-L Upflow Bioreactor by Anaerobic Digestion of Farm Waste - (Peer Reviewed Journal)
Borole, A.P., Klasson, K.T., Ridenour, W., Holland, J., Karim, K., Al-Dahhan, M.H. Methane production in a 100-l upflow bioreactor by anaerobic digestion of farm waste. Applied Biochemistry and Biotechnology. 129-132:887-896.
Poultry Manure-Based Activated Carbons As Mercury Adsorbents     Reprint Icon - (Proceedings)
Klasson, K.T., Lima, I.M., Marshall, W.E. 2005. Poultry manure-based activated carbons as mercury adsorbents. In: Proceedings of the United States-Japan Cooperative Program in Natural Resources, Food and Agriculture Panel, October 22-29, 2005, Susono Fuji, Japan. p. 219-222.
Calculation of Rates for Enzyme and Microbial Kinetics Via a Spline Technique - (Abstract Only)
Klasson, K.T. 2005. Calculation of rates for enzyme and microbial kinetics via a spline technique (abstract). International Symposium on Biocatalysis and Biotechnology: Functional Food and Industrial Products. Paper No. K-2.
Calculation of Rates for Enzyme and Microbial Kinetics Via a Spline Technique     Reprint Icon - (Proceedings)
Klasson, K.T. 2005. Calculation of rates for enzyme and microbial kinetics via a spline technique. In: Proceedings of the United States-Japan Cooperative Program in Natural Resources, Food and Agriculture Panel, October 22-29, 2005, Susono Fuji, Japan. p. 223-230.
Anaerobic Digestion of Animal Waste: Effect of Mode of Mixing - (Peer Reviewed Journal)
Karim, K., Hoffmann, R., Klasson, K.T., Al-Dahhan, M.H. 2005. Anaerobic digestion of animal waste: effect of mode of mixing. Water Research. 39:3597-3606.
Characterization in Vitro and in Vivo of the Putative Multigene 4-Coumarate:coa Ligase Network in Arabidopsis: Syringyl Lignin and Sinapate/sinapyl Alcohol Derivative Formation. - (Peer Reviewed Journal)
Costa, M.A., Bedgar, D.L., Moinuddin, S.G., Kim, K.W., Cardenas, C.L., Cochrane, F.C., Shockey, J.M., Helms, G.L., Amakura, Y., Takahashi, H., Milhollan, J.K., Davin, L.B., Browse, J., Lewis, N.G. 2005. Characterization in vitro and in vivo of the putative multigene 4-coumarate:coa ligase network in arabidopsis: syringyl lignin and sinapate/sinapyl alcohol derivative formation. Phytochemistry. 66:2072-2091.
Er-Localized Omega-3 Fatty Acid Desaturases Are Short-Lived Proteins That Contain Degradation Signals in Their N Termini - (Abstract Only)
Dyer, J.M., Bryan, J., Bourassa, L., Shockey, J.M., and Mullen, R.T. 2005. ER-localized omega-3 fatty acid desaturases are short-lived proteins that contain degradation signals in their N termini (abstract). 2005 Biochemistry and Molecular Biology of Plant Fatty Acids and Glycerolipids Symposium, Abstract A3, page 6, June 10-14, Fallen Leaf Lake, CA. 2005:17
Type 1 and Type 2 Diacylglycerol Acyltransferases from Developing Seeds of Tung (Vernicia Fordii) Display Different Affinities for Eleostearic Acid-Containing Substrates. - (Abstract Only)
Shockey, J.M., Gidda, S., Chapital, D.C., Kuan, J.-C.W., Rothstein, S.J., Mullen, R.T., and Dyer, J.M. 2005. Type 1 and type 2 diacylglycerol acyltransferases from developing seeds of tung (Vernicia fordii) display different affinities for eleostearic acid-containing substrates (abstract). 2005 Biochemistry and Molecular Biology of Plant Fatty Acids and Glycerolipids Symposium, Abstract C3, page 11, June 10-14, Fallen Leaf Lake, CA. 2005:22
Cloning, Functional Analysis, and Subcellular Localization of Two Isoforms of Nadh:cytochrome B5 Reductase from Developing Seeds of Tung (Vernicia Fordii) - (Peer Reviewed Journal)
Shockey, J.M., Dhanoa, P.K., Dupuy, T., Chapital, D.C., Mullen, R.T., and Dyer, J.M. 2005. Cloning, functional analysis, and subcellular localization of two isoforms of NADH:cytochrome b5 reductase from developing seeds of tung (Vernicia fordii). Plant Science. 169(2):375-385.
Spreadsheet Tools for Determination of Derivatives and Microbial Kinetics - (Abstract Only)
Klasson, K.T. 2005. Spreadsheet tools for determination of derivatives and microbial kinetics (abstract). 27th Symposium on Biotechnology for Fuels and Chemicals. Paper No. 6-55.
Effect of Mixing in Anaerobic Digestor on Conversion of Farm Waste to Methane in 100l Upflow Bioreactor - (Abstract Only)
Borole, A.P., Klasson, K.T., Ridenour, W., Holland, J. 2005. Effect of mixing in anaerobic digestor on conversion of farm waste to methane in 100l upflow bioreactor (abstract). 27th Symposium on Biotechnology for Fuels and Chemicals. Paper No. 5-53.
Removal of Mercury from Coal Via Microbial Bioleaching - (Abstract Only)
Borole, A.P., Mckeown, C.K., Klasson, K.T., Hamilton, C.Y. 2005. Removal of mercury from coal via microbial bioleaching (abstract). 27th Symposium on Biotechnology for Fuels and Chemicals. Paper No. 5-54.
Biotransformation of Lipids in Yeast Cells: Enzymatic Conversion of Fatty Acids into Omega-3 and Conjugated Fatty Acids for Potential Usage As Nutraceuticals - (Proceedings)
Dyer, J.M., Shockey, J.M., Mullen, R.T., Chapital, D.C., Kuan, J.-C., and Stewart, G. (2004). Biotransformation of lipids in yeast cells: enzymatic conversion of fatty acids into omega-3 and conjugated fatty acids for potential usage as nutraceuticals. In: Proceedings of the 33rd Annual United States-Japan Cooperative Program in Natural Resources Annual Meeting, December 11, 2004, Tokyo, JA. p. 210-214.
Novel Targeting Signals Mediate the Sorting of Different Isoforms of the Tail-Anchored Membrane Protein Cytochrome B5 to Either Endoplasmic Reticulum Or Mitochondria - (Peer Reviewed Journal)
Hwang, Y.T., Pelitire, S.M., Henderson, M.P.A., Andrews, D.W., Dyer, J.M., and Mullen, R.T. 2004. Novel targeting signals mediate the sorting of different isoforms of the tail-anchored membrane protein cytochrome b5 to either endoplasmic reticulum or mitochondria. Plant Cell 16(11):3002-3019.
The Acyl-Coenzyme a Synthetase Encoded by Lacs2 Is Essential for Normal Cuticle Development in Arabidopsis. - (Peer Reviewed Journal)
Schnurr, J., Shockey, J.M., Browse, J. 2004. The acyl-coenzyme a synthetase encoded by lacs2 is essential for normal cuticle development in arabidopsis. The Plant Cell. 16:629-642.
Biochemical and Molecular Characterization of Ach2, An Acyl-Coa Thioesterase from Arabidopsis Thaliana. - (Peer Reviewed Journal)
Tilton, G.B., Shockey, J.M., Browse, J. 2003. Biochemical and molecular characterization of ach2, an acyl-coa thioesterase from arabidopsis thaliana. Journal of Biological Chemistry. 279:(9)7487-7494.
Steam Activation of Chars Produced from Oat Hulls and Corn Stover - (Peer Reviewed Journal)
Fan, M., Marshall, W.E., Daugaard, D., Brown, R.C. 2004. Steam activation of chars produced from oat hulls and corn stover. Bioresource Technology. 93:103-107.
Last Modified: 4/18/2014
Footer Content Back to Top of Page