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United States Department of Agriculture

Agricultural Research Service

Related Topics

Research Project: BIOTECHNOLOGICAL ENHANCEMENT OF ENERGY CROPS

Location: Genomics and Gene Discovery

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Dihaploid stocks for switchgrass isolated by a screening approach - (Peer Reviewed Journal)
Young, H.A., Hernlem, B.J., Anderton, A.L., Lanzatella-Craig, C., Tobias, C.M. 2010. Dihaploid stocks for switchgrass isolated by a screening approach. BioEnergy Research. 3:305-313.
Genome Sequencing and Analysis of the Model Grass Brachypodium Distachyon. - (Peer Reviewed Journal)
Vogel, J.P., Garvin, D.F., Gu, Y.Q., Lazo, G.R., Anderson, O.D., Bragg, J.N., Chingcuanco, D.L., Weng, Y., Belknap, W.R., Thomson, J.G., Dardick, C.D., Baxter, I.R. 2010. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature. 463:763-768.
Molecular, morphological and cytological analysis of diverse Brachypodium distachyon inbred lines - (Peer Reviewed Journal)
Filiz, E., Ozdemir, B.S., Budak, F., Vogel, J.P., Metin, T., Budak, H. 2010. Molecular, morphological and cytological analysis of diverse Brachypodium distachyon inbred lines. Genome. 52:876-890
Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon - (Peer Reviewed Journal)
Vogel, J.P., Metin, T., Budak, H., Huo, N., Gu, Y.Q., Steinwand, M.A. 2009. Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon Biomed Central (BMC) Plant Biology. 9:Article 88. Available: http://www.biomedcentral.com/1471-2229/9/88/abstract
A Genome May Reduce Your Carbon Footprint - (Review Article)
Tobias, C.M. 2009. A GENOME MAY REDUCE YOUR CARBON FOOTPRINT. The Plant Genome. 2:5-8.
Comparative Genomes in Switchgrass Using 61,585 High-Quality EST - (Peer Reviewed Journal)
Tobias, C.M., Sarath, G., Twigg, P., Lindquist, E., Pangilinan, J., Penning, B., Barry, K., Carpita, N., Lazo, G.R. 2008. Comparative Genomics in Switchgrass Using 61,585 High-Quality EST. The Plant Genome. 1:111-124
Brachypodium distachyon, a New Model for the Grasses - (Book / Chapter)
Vogel, J.P., Bragg, J.N. 2009. Brachypodium distachyon, a New Model for the Grasses. p. 427-449. Genetics and Genomics of the Triticeae.
Unique aspects of the grass cell wall - (Review Article)
Vogel, J.P. 2008. Unique aspects of the grass cell wall. Current Opinion in Plant Biology. 11:301-307.
High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd 21-3 - (Peer Reviewed Journal)
Vogel, J.P., Hill, T.A. 2007. High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd 21-3. Plant Cell Reports. 27:471-478
Edr2 Negatively Regulates Salicylic Acid-Based Defenses and Cell Death During Powdery Mildew Infections of Arabidopsis Thaliana - (Peer Reviewed Journal)
Vorwerk, S., Schiff, C., Santamaria, M., Koh, S., Nishimura, M., Vogel, J., Somerville, C., Somerville, S. 2007 EDR2 negatively regulates salicylic acid-based defenses and cell death during powdery mildew infections of Arabidopsis thaliana. BMC Plant Biology. 7: Issue 35 (on-line journal).
Conserved Requirement for a Plant Host Cell Protein in Powdery Mildew Pathogenesis - (Peer Reviewed Journal)
Consonni, C., Humphry, M., Hartmann, A., Livaja, M., Durner, J., Westphal, L., Vogel, J.P., Lipka, V., Kemmerling, B., Schulze, L., Somerville, S., Panstruga, R. 2006. Conserved requirement for a plant host cell protein in powdery mildew pathogenesis. Nature Genetics. 38:716-720.
Est Sequencing and Phylogenetic Analysis of the Model Grass Brachypodium Distachyon - (Peer Reviewed Journal)
Vogel, J.P., Gu, Y.Q., Twigg, P., Lazo, G.R., Chingcuanco, D.L., Hayden, D.M., Donze, T., Vivia-Lindsay, A., Stamova, B., Coleman-Derr, D. 2006. EST sequencing and phylogenetic analysis of the model grass brachypodium distachyon. Theoretical and Applied Genetics. 113: 186-195.
Genic Microsatellite Markers Derived from Est Sequences of Switchgrass (Panicum Virgatum L.) - (Peer Reviewed Journal)
Tobias, C.M., Hayden, D.M., Twigg, P., Sarath, G. 2006. Genic microsatellite markers derived from EST sequences of switchgrass (Panicum virgatum L.). 6:185-187. Molecular Ecology Notes.
Agrobacterium-Mediated Transformation and Inbred Line Development in the Model Grass Brachypodium Distachyon. - (Peer Reviewed Journal)
Vogel, J.P., Garvin, D.F., Leong, O.M., Hayden, D.M. 2006. Agrobacterium-mediated transformation and inbred line development in the model grass brachypodium distachyon. Plant Cell Tissue And Organ Culture. 84:199-211.
Analysis of Expressed Sequence Tags and the Identification of Associated Short Tandem Repeats in Switchgrass - (Peer Reviewed Journal)
Tobias, C.M., Twigg, P., Hayden, D.M., Vogel, K.P., Mitchell, R., Lazo, G.R., Chow, E.K., Sarath, G. 2005. Analysis of expressed sequence tags and the identification of associated short tandem repeats in switchgrass. Theoretical and Applied Genetics. 111: 956-964.
Last Modified: 8/1/2014
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