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United States Department of Agriculture

Agricultural Research Service

Joanne A. Labate

Molecular Biologist (Plants)


Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Genetic structure of the four wil tomato species in the Solanum peruvianum s.l. species complex - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Strickler, S., Mueller, L. 2014. Genetic structure of the four wil tomato species in the Solanum peruvianum s.l. species complex. Genome. 57:169-180.
Multiple loss-of-function 5-O-Glucosyltransferase alleles revealed in Vitis vinifera, but not in other Vitis species - (Abstract Only) - (17-Jan-14)
Genetics, Genomics and Breeding of Tomato - (Book / Chapter)
Liedl, B., Labate, J.A., Stommel, J.R., Slade, A. 2013. Genetics, Genomics and Breeding of Tomato. Boca Raton, FL: Science Publishers. 520 p.
A phylogenomic analysis of the grape genus (Vitis) reveals broad reticulation and concurrent diversification during quaternary climate change - (Peer Reviewed Journal)
Wan, Y., Schwaninger, H.R., Baldo, A.M., Labate, J.A., Simon, C., Zhong, G. 2013. A phylogenomic analysis of the grape genus (Vitis) reveals broad reticulation and concurrent diversification during quaternary climate change. BMC Evlutionary Biology. 13:141.
Genotype and environmental interaction for fruit quality traits in vintage tomato varieties - (Peer Reviewed Journal)
Panthee, D., Labate, J.A., Mcgrath, M., Francis, D., Breksa III, A.P., Robertson, L.D. 2013. Genotype and environmental interaction for fruit quality traits in vintage tomato varieties. Euphytica. 193:169-182.
Evaluation of tomato germplasm for flavor and flavor contributing components - (Peer Reviewed Journal)
Panthee, D.R., Labate, J.A., Robertson, L.D. 2013. Evaluation of tomato germplasm for flavor and flavor contributing components. Plant Genetic Resources: Characterization and Utilization. 11:106-113.
Tomato (Solanum section Lycopersicon spp.) phylogenetic study: aligned genomic sequences for 47 markers used to analyze introgression in domesticated tomato Reprint Icon - (Other)
Labate, J.A., Robertson, L.D. 2012. Tomato (Solanum section Lycopersicon spp.) phylogenetic study: aligned genomic sequences for 47 markers used to analyze introgression in domesticated tomato. European Molecular Biology. European Nucleotide Archive Accessions HE977919-HE978211.
Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D. 2012. Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles. Biomed Central (BMC) Plant Biology. 12:133.
Mining wild species elleles from introgressed genotypes - (Abstract Only)
Labate, J.A., Robertson, L.D. 2012. Mining wild species elleles from introgressed genotypes. ASA-CSSA-SSSA Annual Meeting. Paper No. 1.
Evaluation of tomato germplasm for flavor and flavor-contributing components - (Abstract Only)
Panthee, D., Labate, J.A., Robertson, L.D. 2012. Evaluation of tomato germplasm for flavor and flavor-contributing components. Proceedings American Society of Horticultural Sciences. Vol. 109, p. 90.
Magnitude of genotype x environment interactions affecting tomato fruit quality - (Peer Reviewed Journal)
Panthee, D., Cao, C., Debenport, S., Rodriguez, G., Labate, J.A., Robertson, L.D., Breksa Iii, A.P., Van Der Knaap, E., Mcspadden-Gardener, B. 2012. Magnitude of genotype x environment interactions affecting tomato fruit quality. HortScience. 47:721-726.
Biochemical evaluation of tomato germplasm part II: evaluation of a core collection - (Abstract Only)
Labate, J.A., Sheffer, S.M., Panthee, D., Robertson, L.D. 2012. Biochemical evaluation of tomato germplasm part II: evaluation of a core collection. Plant Germplasm Operations Committee Meeting. Vol. 4, P. 1.
Use of DNA sequence data to interpret diversity in tomato - (Abstract Only)
Labate, J.A., Robertson, L.D. 2012. Use of DNA sequence data to interpret diversity in tomato. Plant Germplasm Operations Committee Meeting. Vol 4, p. 1..
Biochemical evaluation of tomato germplasm part I: workflow and methods - (Abstract Only)
Robertson, L.D., Sheffer, S.M., Labate, J.A. 2012. Biochemical evaluation of tomato germplasm part I: workflow and methods. Plant Germplasm Operations Committee Meeting. Vol. 4, p. 1.
Phenotypic and molecular variation in 44 vintage tomato varieties - (Proceedings)
Labate, J.A., Panthee, D., Mcgrath, M., Francis, D., Breksa Iii, A.P., Robertson, L.D. 2011. Phenotypic and molecular variation in 44 vintage tomato varieties. Tomato Breeders Roundtable Proceedings. Vol. 43, p. 10.
AlleleCoder: a PERL script for coding codominant polymorphism data for PCA analysis - (Review Article)
Baldo, A.M., Francis, D., Caramante, M., Robertson, L.D., Labate, J.A. 2011. AlleleCoder: a PERL script for coding codominant polymorphism data for PCA analysis. Plant Genetic Resources: Characterization and Utilization. 10: 1-3.
Diversity and population structure in a geographical sample of tomato (Solanum lycopersicum L.) accessions - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Balch, T., Sheffer, S.M. 2011. Diversity and population structure in a geographical sample of tomato (Solanum lycopersicum L.) accessions. Crop Science. 51:1068-1079.
Comparing alleles between wild and domesticated tomato - (Other)
Baldo, A.M., Robertson, L.D., Labate, J.A. 2010. Comparing alleles between wild and domesticated tomato. Plant Genome Conference Proceedings.
Diversity in a Collection of Heirloom Tomato Varieties - (Other)
Labate, J.A., Francis, D., Mcgrath, M., Panthee, D., Robertson, L.D. 2010. Diversity in a Collection of Heirloom Tomato Varieties. Annual Meeting Horticultural Society.HortScience 45:S145.
Single nucleotide polymorphisms (SNPs) in a set of expressed-sequence tag (EST) and conserved ortholog set II (COSII) markers in cultivated tomato (Solanum lycopersicum L.) - (Other)
Labate, J.A., Robertson, L.D. 2010. Single nucleotide polymorphisms (SNPs) in a set of expressed-sequence tag (EST) and conserved ortholog set II (COSII) markers in cultivated tomato (Solanum lycopersicum L.). National Center for Biotechnology Information (NCBI).
Characterization of alleles in a diversity panel of tomato - (Other)
Labate, J.A., Robertson, L.D., Baldo, A.M. 2009. Characterization of alleles in a diversity panel of tomato [abstract]. American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America Int'l Annual Meetings, Pittsburgh, PA. oral presentation 86-6.
Phenotypic Characterization of a Diversity Panel of Tomato - (Other)
Robertson, L.D., Balch, T., Sheffer, S.M., Labate, J.A. 2009. Phenotypic Characterization of a Diversity Panel of Tomato. ASA-CSSA-SSSA Int'l Annual Meetings, poster presentation 85-5, Pittsburgh, PA.
Multilocus sequence data reveal extensive departures from equilibrium in domesticated tomato (Solanum lycopersicum L.) - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Baldo, A.M. 2009. Multilocus sequence data reveal extensive departures from equilibrium in domesticated tomato (Solanum lycopersicum L.). Heredity 103:257-267.
Est, Cosii, and Arbitrary Gene Markers Give Similar Estimates of Nucleotide Diversity in Cultivated Tomato (Solanum Lycopersicum) - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Wu, F., Tanksley, S.D., Baldo, A.M. 2009. EST, COSII, and arbitrary gene markers give similar estimates of nucleotide diversity in cultivated tomato (Solanum lycopersicum). Journal of Theoretical and Applied Genetics. 118:1005-1014.
Tomato - (Book / Chapter)
Labate, J.A., Grandillo, S., Fulton, T., Munos, S., Caicedo, A., Peralta, I., Ji, Y., Chetelat, R., Scott, J.W., Gonzalo, M.J., Francis, D., Yang, W., Van Der Knaap, E., Baldo, A.M., Smith-White, B., Mueller, L., Prince, J., Blanchard, N., Storey, D., Stevens, M., Robbins, M., Wang, J., Liedl, B., Oconnell, M., Stommel, J.R., Aoki, K., Iijima, Y., Slade, A., Hurst, S., Loeffler, D., Steine, M., Vafeados, D., Mcguire, C., Freeman, C., Amen, A., Goodstal, J., Facciotti, D., Van Eck, J., Causse, M. 2007. Tomato. Book Chapter. In: Kole, C. editor. Genome mapping and molecular breeding in plants. Volume 5 Vegetables. NY. Springer Publishing Co. p. 1-125.
The Distribution of Genetic Variation in Cultivated Tomato - (Proceedings) - (01-Dec-06)
Snp Validation and Genetic Diversity in Cultivated Tomatoes and Grapes - (Proceedings) - (01-Dec-06)
Polymorphism among EST-based markers in tomato - (Abstract Only) - (13-Apr-06)
Genetic Resources of Tomato (Lycopersicon esculentum var. esculentum) and Wild Relatives - (Book / Chapter)
Robertson, L.D., Labate, J.A. 2007. Genetic Resources of Tomato (Lycopersicon esculentum var. esculentum) and Wild Relatives. Genetic Improvement of Solanaceous Crops, Vol 2: Tomato. p. 25-75.
Highly Polymorphic Genes in Cultivated Tomato - (Peer Reviewed Journal)
Baldo, A.M., Robertson, L.D., Labate, J.A. 2005. Highly polymorphic genes in cultivated tomato. Hortscience. 40:999.
Tomato Snp Discovery by Est Mining and Resequencing - (Peer Reviewed Journal)
Labate, J.A., Baldo, A.M. 2005. Tomato snp discovery by est mining and resequencing. Molecular Breeding. 16:343-349.
Discovery of Highly Polymorphic Genes in Tomato Cultivars - (Peer Reviewed Journal)
Labate, J.A., Baldo, A.M. Discovery of highly polymorphic genes in tomato cultivars. Molecular Breeding. 2005.
High-Throughput Snp Prediction in Tomatoes Based on Ests - (Proceedings)
Baldo, A.M., Huntley, D., Robertson, L.D., Labate, J.A. 2005. High-throughput snp prediction in tomatoes based on ests. Tomato Breeders Roundtable Proceedings. p. 7 In Final Abstracts Guide, Plant and Animal Genome XIII, San Diego, Ca.
Use of Sequence-Based Polymorphisms for Studing Genetic Diversity of Winter Squash - (Proceedings)
Robertson, L.D., Baldo, A.M., Sheffer, S.M., Labate, J.A. 2005. Use of sequence-based polymorphisms for studing genetic diversity of winter squash. Meeting Abstract. p. 153 In Final Abstracts Guide, Plant & Animal Genome XII, San Diego, CA.
Prediction of Single Nucleotide Polymorphisms in Domestic Tomato: How Useful Is Est Sequence Diversity? - (Proceedings)
Baldo, A.M., Labate, J.A., Robertson, L.D., 2004. Prediction of single nucleotide polymorphisms in domestic tomato: how useful is EST sequence diversity?. 12th International Conference on Intelligent Systems for Molecular Biology (ISMB 2004)
Utility of Bocal-a and Boap1-a Genotypes in Identifying Broccoli and Cauliflower Accessions - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Bjorkman, T. 2004. Utility of bocal-a and boap1-a genotypes in identifying broccoli and cauliflower accessions. Hortscience. 39:773.
A Search for Molecular Diversity in Tomato - (Proceedings)
BALDO, A.M., LABATE, J.A., ROBERTSON, L.D. A SEARCH FOR MOLECULAR DIVERSITY IN TOMATO. PLANT AND ANIMAL GENOME ABSTRACTS. 2004.
Sequence-Based Amplified Polymorphisms Are Useful for Studying Genetic Diversity of Winter Squash - (Proceedings)
ROBERTSON, L.D., BALDO, A.M., LABATE, J.A. SEQUENCE-BASED AMPLIFIED POLYMORPHISMS ARE USEFUL FOR STUDYING GENETIC DIVERSITY OF WINTER SQUASH. PLANT AND ANIMAL GENOME ABSTRACTS. 2004.
A Search for Molecular Diversity in Tomato - (Proceedings)
BALDO, A.M., LABATE, J.A., ROBERTSON, L.D. A SEARCH FOR MOLECULAR DIVERSITY IN TOMATO. New England Molecular Evoluationary Biologists Meeting, Storrs, CT. 2003. . 2003.
Polymorphism Prediction - (Proceedings)
BALDO, A.M., LABATE, J.A. POLYMORPHISM PREDICTION. ISMB Intelligent Systems in Molecular Biology. 2003.
Temporal Changes in Allele Frequencies in Two Directionally Selected Maize Populations - (Peer Reviewed Journal) - (31-Mar-99)
Population Genetics of Increased Hybrid Performance Between Two Maize Populations under Reciprocal Recurrent Selection - (Proceedings) - (13-Feb-98)
Molecular Variation in Two Maize Populations Undergoing Selection for Improved Hybrid Performance - (Abstract Only) - (30-Mar-97)
Genetic Diversity after Reciprocal Recurrent Selection in Bsss and Bscb1 Maize Populations - (Abstract Only) - (04-Nov-96)
Molecular Genetic Diversity after Reciprocal Recurrent Selection in Bsss and Bscb1 Maize Populations - (Peer Reviewed Journal) - (20-Aug-96)
Genome Duplication in Soybean (Glycine Subgenus Soja) - (Peer Reviewed Journal) - (06-Jun-96)
Last Modified: 5/18/2012
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