Projects

GERMPLASM ENHANCEMENT AND GENETIC IMPROVEMENT OF COTTON Appropriated (D)   Accession Number: 413080

Publications (Clicking on the reprint icon will take you to the publication reprint.)

Interspecific chromosomal effects on agronomic traits in Gossypium hirsutum by AD analysis using intermated G. barbadense chromosome substitution lines - (Peer Reviewed Journal)

Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2013. Interspecific chromosomal effects on agronomic traits in Gossypium hirsutum by AD analysis using intermated G. barbadense chromosome substitution lines. Theoretical and Applied Genetics. 126:109-117.

A cotton fiber associated cyclin-dependent kinase A gene: Characterization and chromosomal location - (Peer Reviewed Journal)

Gao, W., Saha, S., Ma, D., Guo, Y., Jenkins, J.N., Stelly, D.M. 2012. A cotton-fiber-associated cyclin-dependent kinase A gene: Characterization and chromosomal location. International Journal of Plant Genomics. 2012:613812.

Development of new candidate gene and EST-based molecular markers for Gossypium species - (Peer Reviewed Journal)

Buyyarapu, R., Kantety, R.V., Yu, J., Saha, S., Sharma, G.C. 2011. Development of new candidate gene and EST-based molecular markers for Gossypium species. International Journal of Plant Genomics. 2011:Article 894598.

A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome - (Peer Reviewed Journal)

Yu, J., Kohel, R.J., Fang, D.D., Cho, J., Van Deynze, A., Ulloa, M., Hoffman, S.M., Pepper, A.E., Stelly, D.M., Jenkins, J.N., Saha, S., Kumpatla, S.P., Shah, M.R., Hugie, W.V., Percy, R.G. 2012. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. Genes, Genomes, Genetics. 2:43-58.

Genetic diversity in Gossypium genus - (Book / Chapter)

Abdurakhmonov, I.K., Buriev, Z.T., Shermatov, S.E., Abdullaev, A.A., Urmonov, K., Kushanov, F., Egamberdiev, S.S., Shapulatov, U., Abdukarimov, A., Saha, S., Jenkins, J.N., Kohel, R.J., Yu, J., Pepper, A.E., Kumpatala, S., Ulloa, M. 2012. Genetic diversity in Gossypium genus. In: Caliskan, M., editor. Genetic Diversity in Plants. InTech. p. 313-338.

Chromosome substituution lines: Concept, development and utilization in the genetic improvement of upland cotton - (Book / Chapter)

Saha, S., Stelly, D.M., Raska, D.A., Wu, J., Jenkins, J.N., McCarty, Jr., J.C., Makamov, A., Gotmare, V., Abudurakhmonov, I., Campbell, B.T. 2012. Chromosome substitution lines: Concept, development and utilization in the genetic improvement of upland cotton. In: Abdurakhmoov, I.Y., editor. Plant Breeding. InTech. p. 107-128.

Role of biotechnology in sustainable development of cotton - (Proceedings)

Saha, S. 2011. Role of biotechnology in sustainable development of cotton. International Cotton Advisory Committee Recorder. XXIX:4-10.

Molecular evolution of the clustered MMIC-3 multigene family of Gossypium species - (Peer Reviewed Journal) - (26-Jul-11)

Delineation of Interspecific Epistasis on Fiber Quality Traits in Gossypium hirsutum by ADAA Analysis of Intermated G. barbadense Chromosome Substitution Lines - (Peer Reviewed Journal)

Saha, S., Wu, J., Jenkins, J.N., McCarty, J.C., Hayes, R.W., Stelly, D.M. 2011. Delineation of interspecific epistasis on fiber quality traits in Gossypium hirsutum by ADAA analysis of intermated G. barbadense chromosome substitution lines. Theoretical and Applied Genetics. 122:1351-1361.

Genetic effects of individual chromosomes in cotton cultivars detected by using chromosome substitution lines as genetic probes - (Peer Reviewed Journal)

Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S. 2010. Genetic effects of individual chromosomes in cotton cultivars detected by using chromosome substitution lines as genetic probes. Genetica. 138:1171-1179.

Molecular Evolution of Clustered MIC-3 (Meloidogyne Induced Cotton -3) Multigene Family of Gossypium Species - (Abstract Only) - (20-Sep-10)

Interspecific Chromosome Substitution Lines as Genetic Resources for Improvement, Trait Analyses and Genomic Inference - (Abstract Only) - (20-Sep-10)

Coordination and collaboration to document the global cotton germplasm resources - (Proceedings)

Frelichowski, J.E., Campbell, B.T., Saha, S., Percy, R.G., Jenkins, J.N., Park, W., Mayee, C., Gotmare, V., Dessauw, D., Giband, M. 2010. Coordination and collaboration to document the global cotton germplasm resources. Proceedings of the International Cotton Genome Initiative Workshop, September 21-23, 2010, Canberra, Australia. p. 24.

Atypical Ligon Lintless-2 Phenotype in Cotton - (Peer Reviewed Journal)

An, C., Jenkins, J.N., McCarty Jr., J.C., Saha, S. 2010. Atypical Ligon Lintless-2 Phenotype in Cotton. Journal of Cotton Science. 14:13-16.

Characterization and Promoter Analysis of a Cotton Ring-Type Ubiquitin Ligase (E3) Gene - (Peer Reviewed Journal)

Ho, M., Saha, S., Jenkins, J.N., Ma, D. 2010. Characterization and promoter analysis of a cotton ring-type ubiquitin ligase (E3) gene. Molecular Biotechnology. 46:140-148.

Status of the global cotton germplasm resources - (Peer Reviewed Journal)

Campbell, B.T., Saha, S., Jenkins, J.N., Park, W., Percy, R.G., Frelichowski, J.E., Mayee, C., Gotmare, V., Dessauw, D., Giband, M., Du, X., Jia, Y., Constable, G., Dillon, S., Abdurakhmonov, I.Y., Abdukarimov, A., Rizaeva, S.M., Adullaev, A.A., Barroso, P.V., Padua, J.G., Hoffman, L.V., Podolnaya, L. 2010. Status of the global cotton germplasm resources. Crop Science. 50:1161-1179.

Genetic Dissection of Chromosome Substitution Lines of Cotton to Discover Novel Gossypium barbadense L. Alleles for Improvement of Agronomic Traits - (Peer Reviewed Journal)

Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Hayes, R.W., Stelly, D. 2010. Genetic Dissection of Chromosome Substitution Lines of Cotton to Discover Novel Gossypium barbadense L. Alleles for Improvement of Agronomic Traits. Journal of Theoretical and Applied Genetics. 120:1193-1205.

Clustering, haplotype diversity and locations of MIC-3: a unique root-specific defense-related gene family in upland cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)

Buriev, Z.T., Saha, S., Abdurakhmonov, I.Y., Jenkins, J.N., Abdukarimov, A., Scheffler, B.E., Stelly, D.M. 2010. Clustering, haplotype diversity and locations of MIC-3: a unique root-specific defense-related gene family in upland cotton (Gossypium hirsutum L.). Theoretical and Applied Genetics. 120:587-606.

SSR-FACILITATED IDENTIFICATION OF INTERSPECIFIC HYPOANEUPLOID HYBRIDS OF GOSSYPIUM HIRSUTUM X G. TOMENTOSUM NUTT. - (Peer Reviewed Journal)

Gutierrez, O.A., Stelly, D.M., Saha, S., Jenkins, J.N., McCarty Jr., J.C., Raska, D.A., Scheffler, B.E. 2009. Integrative placement and orientation of non-redundant SSR loci in cotton linkage groups by deficiency analysis. Molecular Breeding. 23:693-707.

Global view of cotton germplasm resources - (Abstract Only)

Saha, S., Campbell, B.T., Jenkins, J.N., Park, W., Percy, R.G., Frelichowski, J.E., Mayee, C., Gotmare, V., Dessauw, D., Giband, M., Du, Y., Jia, Y., Constable, G., Dillon, S., Abdurakhmonov, A., Abdukarimov, A.A., Rizaeva, S., Adullaev, A.A., Barroso, P.A., Padua, J.G., Hoffmann, L.V. 2009. Global view of cotton germplasm resources. National Cotton Council Beltwide Cotton Conference. p. 658.

Genetic changes in plant growth and their associations with chromosomes from Gossypium hirsutum L. in G. hirsutum L. - (Peer Reviewed Journal)

Wu, J., McCarty Jr., J.C., Saha, S., Jenkins, J.N., Hayes, R.W. 2009. Genetic Changes in Plant Growth and their Associations with Chromosomes from Gossypium hirsutum L. in G. hirsutum L. Genetica. 137:56-66.

Linkage disequilibrium based association mapping of fiber quality traits in G. hirsutum L. variety germplasm - (Peer Reviewed Journal)

Abdurakhmonov, I.Y., Saha, S., Jenkins, J.N., Buriev, Z.T., Shermatov, S.E., Scheffler, B.E., Pepper, A.E., Yu, J., Kohel, R.J., Abdukarimov, A. 2009. Linkage disequilibrium based association mapping of fiber quality traits in G. hirsutum L. variety germplasm. Genetica. 136:401-417.

Genetic detection of node of first fruiting branch in crosses of a cultivar with two exotic accessions of Upland cotton - (Peer Reviewed Journal)

Guo, Y., McCarty Jr., J.C., Jenkins, J.N., An, C., Saha, S. 2009. Genetic detection of node of first fruiting branch in crosses of a cultivar with two exotic accessions of upland cotton. Euphytica. 166:317-329.

Chromosomal assignment of ALFP markers in upland cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)

Myers, G.M., Jiang, B., Akash, M.W., Badigannavar, A., Saha, S. 2009. Chromosomal assignment of ALFP markers in upland cotton (Gossypium hirsutum L.). Euphytica. 165:391-399.

Molecular diversity and association mapping of fiber quality traits in exotic G. hirsutum L. germplasm - (Peer Reviewed Journal)

Abdurakhmonov, I.Y., Kohel, R.J., Yu, J., Pepper, A.E., Abdullaev, A.A., Kushanov, F.N., Salakhutdinov, I.B., Buriev, Z.T., Saha, S., Scheffler, B.E., Jenkins, J.N., Abdukarimov, A. 2008. Molecular diversity and association mapping of fiber quality traits in exotic G. hirsutum L. germplasm. Genomics. 92:478-487.

Interspecific chromosome substitution lines as genetic resources for improvement, trait analysis and genomic inference - (Abstract Only)

Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Interspecific chromosome substitution lines as genetic resources for improvement, trait analysis and genomic inference [abstract]. Cotton Science. 20(S):84.

Chromosome substitution lines: useful genomic resources in cotton - (Abstract Only)

Saha, S., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Chromosome substitution lines: useful genomic resources in cotton [abstract]. Cotton Science. 20(S):111.

Constructing molecular linkage maps of chromosome 14sh and 22 sh and QTL mapping for major traits by use of substitution lines of Gossypium hirsutum L. - (Abstract Only)

Luan, M., Guo, X., Zhang, Y., Yao, J., Saha, S., Jenkins, J.N. 2008. Constructing molecular linkage map and chromosome 14sh and 33sh and QTL mapping for major traits by use of substitution lines of Gossypium hirsutum L. Cotton Science. 20(S):85.

A novel allele of Li-2 producing different types of fibers in cotton seeds in different branches of the same plant - (Abstract Only)

An, C., Jenkins, J.N., Saha, S., McCarty Jr., J.C. 2008. A novel allele of Li-2 producing different types of fibers in cotton seeds in different branches of the same plant [abstract]. Agronomy Abstracts. CD-ROM.

Interspecific chromosome substitution lines in the genetic improvement of Upland cotton - (Abstract Only)

Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Interspecific chromosome substitution lines in the genetic improvement of Upland cotton. Agronomy Abstracts. Paper No. 718-8.

Genetic analysis of agronomic and fiber traits using four interspecific chromosome substitution lines - (Peer Reviewed Journal)

Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Stelly, D.M. 2008. Genetic analysis of agronomic and fiber traits using four interspecific chromosome substitution lines in cotton. Plant Breeding. 127:612-618.

Genetic association of lint yield with its components in cotton chromosome substitution lines - (Peer Reviewed Journal)

Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Percy, R.G. 2008. Genetic association of lint yield with its components in cotton chromosome substitution lines. Euphytica. 164:199-207.

Cotton (Gossypium spp.) R2R3-MYB transcription factors SNP identification, phylo-genomic characterization, chromosome localization and linkage mapping - (Peer Reviewed Journal)

An, C., Saha, S., Jenkins, J.N., Ma, D., Scheffler, B.E., Kohel, R.J., Yu, J., Stelly, D.M. 2008. Cotton (Gossypium spp.) R2R3-MYB transcription factors SNP identification, phylogenomic characterization, chromosome localization and linkage mapping. Theoretical and Applied Genetics. 161:1015-1026.

Chromosome substitution lines (CS-B) revealed the presence of cryptic beneficial alleles in G. barbadense with potential to increase lint and seedcotton yield in Upland cotton - (Abstract Only)

Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2008. Chromosome substitution lines (CS-B) revealed the presence of cryptic beneficial alleles in G. barbadense with potential to increase lint and seed cotton yield in Upland cotton [abstract]. National Cotton Council Beltwide Cotton Conference. p. 831.

Identification of differentially expressed genes associated with cotton fiber development in a chromosomal substitution line (CS-B22sh) - (Peer Reviewed Journal)

Wu, Z., Soliman, K.M., Bolton, J.J., Saha, S., Jenkins, J.N. 2008. Identification of differentially expressed genes associated with cotton fiber development in a chromosomal substitution line (CS-B22sh). Genomics. 8:166-174.

BAC-DERIVED SSR CHROMOSOME LOCATIONS IN COTTON - (Peer Reviewed Journal)

Guo, Y., Saha, S., Yu, J., Jenkins, J.N., Kohel, R.J., Scheffler, B.E., Stelly, D.M. 2008. BAC-derived SSR chromosome locations in cotton. Euphytica. 161:361-370.

Lessons Learned and Challenges Ahead for Cotton Genome Mapping. - (Proceedings)

Ulloa, M., Saha, S., Yu, J., Jenkins, J.N., Meredith Jr, W.R., Kohel, R.J. 2008. Lessons Learned and Challenges Ahead for Cotton Genome Mapping. World Cotton Res. Conf. (Proc) paper no. 1798.

QTL for node of first fruiting branch in a cross of an Upland cotton, Gossypium hirsutum L., cultivar with primitive accession Texas 701 - (Peer Reviewed Journal)

Guo, Y., McCarty Jr., J.C., Jenkins, J.N., Saha, S. 2008. QTLs for node of first fruiting branch in a cross of an upland cotton, Gossypium hirsutum L., cultivar with primitive accession Texas 701. Euphytica. 163:113-122.

Lessons Learned and Challenges Ahead of the Cotton Genome Mapping. - (Abstract Only)

Ulloa, M., Saha, S., Yu, J. 2007. Lessons Learned and Challenges Ahead of the Cotton Genome Mapping. Refereed Proc. World Cotton Res. Conf. Lubbock, TX CDROM paper no. 1853.

International Genetic, Cytogenetic and Germplasm Resources for Cotton Genomics and Genetic Improvement - (Proceedings)

Stelly, D.M., Lacape, J., Dessauw, E.G.A.D., Kohel, R.J., Mergeai, G., Sanamyan, M., Adburakhmonov, I.Y., Zhang, T., Wang, K., Saha, S., Frelichowski, J.E. 2007. International genetic, cytogenetic and germplasm resources for cotton genomics and genetic improvement. In: Proceedings of International Cotton Advisory Committee World Cotton Research Conference, September 10-14, 2007, Lubbock, Texas.

Towards Sequencing Cotton (Gossypium) Genomes - (Peer Reviewed Journal)

Chen, Z., Scheffler, B.E., Dennis, E., Triplett, B.A., Zhang, T., Chen, X., Stelly, D., Rabinowicz, P., Town, C., Arioli, T., Brubaker, C., Cantrell, R., Lacape, J., Ulloa, M., Chee, P., Gingle, A.R., Haigler, C.H., Percy, R.G., Saha, S., Wilkins, T., Wright, R.I., Van Deynze, A., Zhu, Y., Yu, S., Guo, W., Abdurakhmonov, I., Katageri, I., Ur-Rahman, M., Zafar, Y., Yu, J., Kohel, R.J., Wendel, J., Paterson, A. 2007. Towards Sequencing Cotton (Gossypium) Genomes. Plant Physiology. 145:1303-1310.

Transcriptome profiling, sequence characterization, and assignment to chromosomes of SNP markers for EXPANSIN genes in cotton - (Peer Reviewed Journal)

An, C., Saha, S., Jenkins, J.N., Scheffler, B.E., Wilkins, T.A., Stelly, D.M. 2007. Transcriptome profiling, sequence characterization, and SNP-based chromosomal assignment of the EXPANSIN genes in cotton. Molecular Genetics and Genomics. 278:539-553.

Molecular and SNP characterization of two genome specific transcription factor genes GhMyb8 and GhMyb10 in cotton species - (Peer Reviewed Journal)

Hsu, C., An, C., Saha, S., Ma, D., Jenkins, J.N., Scheffler, B.E., Stelly, D. 2008. Molecular and SNP characterization of two genome specific transcription factor genes GhMyb8 and GhMyb10 in cotton species. Euphytica. 159:259-273.

GENETIC EFFECTS OF THIRTEEN GOSSYPIUM BARBADENSE L. CHROMOSOME SUBSTITUTION LINES IN TOPCROSSES WITH UPLAND COTTON CULTIVARS: II. FIBER QUALITY TRAITS - (Peer Reviewed Journal)

Jenkins, J.N., McCarty Jr., J.C., Wu, J., Saha, S., Gutierrez, O.A., Hayes, R.W., Stelly, D.M. 2007. Genetic effects of thirteen Gossypium barbadense L. chromosome substitution lines in topcrosses with upland cotton cultivars: II. Fiber quality traits. Crop Science. 47:561-572.

MICROSATELLITE MARKERS ASSOCIATED WITH COTTON FIBER DEVELOPMENT - (Peer Reviewed Journal)

Abdurakhmonov, I.Y., Buriev, Z.T., Saha, S., Pepper, A.E., Musaev, J.A., Almatov, A., Shermatov, S.E., Kushanov, F.N., Mavlonov, G.T., Reddy, U.K., Yu, J., Jenkins, J.N., Kohel, R.J., Abdukarimov, A. 2007. Microsatellite markers associated with lint percentage trait in cotton, Gossypium hirsutum. Euphytica. 156:141-156.

Development of Gene-based Markers and their Chromosomal Localization in Cotton (Gossypium sp.) - (Abstract Only)

Buyyarapu, R., Kantety, R., Saha, S., Yu, J., Soliman, K., Sharma, G. 2007. Development of gene-based markers and their chromosomal localization in cotton (Gossypium sp.). Plant and Animal Genome Conference. p. 118.

The R2R3-Myb transcription fators of cotton: SNP characterization, chromosomal assignment, and phylogenetic analysis - (Abstract Only)

An, C., Saha, S., Jenkins, J.N., Scheffler, B.E., Ma, D-P., Stelly, D.M. 2007. MYB genes, a family of transcription fators: SNPS characterization, chromosomal location, and phylogenetic analysis [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1620.

Association of flowering time genes with simple sequence repeat markers in a primitive cotton accession (Gossypium hirsutum L.) - (Abstract Only)

Guo, Y., MCcarty Jr., J.C., Jenkins, J.N., Saha, S., Wu, J. 2007. QTL analyses of flowering time in a primitive cotton accession (Gossypium hirsutum L.)[Abstract]. National Cotton Council Beltwide Cotton Conference. p. 231.

Determination of chromosome effects for cotton cultivars crossed with chromosome substitution lines and TM-1 - (Abstract Only)

Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Wallace, T. 2007. Determination of chromosome effects for cotton cultivars crossed with chromosome substitution lines and TM-1 [abstract]. National Cotton Council Beltwide Cotton Conference. p. 2115.

Developement of gene and EST-based markers and their chromosomal localization in cotton - (Abstract Only)

Buyyarapu, R., Kantety, R., Saha, S., Yu, J., Soliman, K., Sharma, G. 2007. Developement of gene and EST-based markers and their chromosomal localization in cotton [abstract]. In: Proceedings of Plant and Animal Genome XV Conference, January 13-17, 2007, San Diego, California. Paper No. P118.

Genome-wide linkage disequilibruim revealed by microsatellite markers and association study of fiber quality traits in cotton - (Abstract Only)

Abdurakhmonov, I.Y., Kohel, R.J., Saha, S., Pepper, A.E., Yu, J., Buriev, Z.T., Abdullaev, A., Shermatov, S., Jenkins, J.N., Scheffler, B.E., Abdukarimov, A. 2007. Genome-wide linkage disequilibruim revealed by microsatellite markers and association study of fiber quality traits in cotton [abstract]. In: Proceedings of Plant and Animal Genome XV Conference, January 13-17, 2007, San Diego, California. Paper No. W199.

THE ROLE OF INDUCED MUTAGENESIS IN CONVERSION OF PHOTOPERIOD DEPENDENCE IN COTTON: HOMOGENIZING EFFECT OF INDUCED MUTAGENESIS - (Peer Reviewed Journal)

Abdurakhmonov, I.Y., Kushanov, F., Djaniqulov, F., Buriev, Z., Pepper, A.E., Fayzieva, N., Mavlonov, G., Saha, S., Jenkins, J.N., Abdukarimov, A. 2007. The role of induced mutation in conversion of photoperiod dependence in cotton. Journal of Heredity. 98:258-266.

EVIDENCE OF CLUSTERING FOR THE MIC-3 ROOT-SPECIFIC GENE FAMILY ASSOCIATED WITH NEMATODE RESISTANCE IN GOSSYPIUM SPP. - (Abstract Only)

Buriev, Z., Saha, S., Abdurakhmonov, I.Y., Jenkins, J.N., Abukarimov, A., Scheffler, B.E., Stelly, D.M., Wubben, M. 2006. Evidence of clustering for the mic-3 root-specific gene family associated with nematode resistance in gossypium spp [abstract]. American Society of Agronomy Abstracts. CDROM.

INTERSPECIFIC CHROMOSOME SUBSTITUTION LINES IN UPLAND COTTON IMPROVEMENT - (Abstract Only)

Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2006. Interspecific chromosome substitution lines in upland cotton improvement. International Cotton Genome Initiative Workshop. p. 11.

A STRATEGY FOR DEVELOPING SNP MARKERS FOR THE MIC-3 ROOT-SPECIFIC GENE FAMILY ASSOCIATED WITH NEMATODE RESISTANCE IN GOSSYPIUM SPP. - (Abstract Only)

Buriev, Z., Saha, S., Abdurakhmonov, I.Y., Jenkins, J.N., Abdukarimov, A., Scheffler, B.E., Stelly, D.M., Wubben, M. 2006. A strategy for developing snp markers for the mic-3 root-specific gene family associated with nematode resistance in gossypium spp. [abstract]. Proceedings International Cotton Genome Initiative Conference. Available: http:\\cgi.tamu.edu\pds\icgi06-abs-final.

UPLAND (GOSSYPIUM HIRSUTUM) X HAWAIIAN COTTON (G. TOMENTOSUM) F1 HYBRID HYPOANEUPLOID CHROMOSOME SUBSTITUTION SERIES - (Peer Reviewed Journal)

Saha, S., Raska, D.A., Stelly, D.M. 2006. Upland (Gossypium hirsutum L.) x Hawaiian cotton (G. tomentosum Nutt. ex Seem.) F1 hybrid hypoaneuploid chromosome substitution series. Journal of Cotton Science. 10:263-272.

Linkage Disequilibrium Based Association Mapping of Fiber Quality Traits in Cotton Using Diverse Cotton Germplasm from Uzbekistan - (Abstract Only)

Abdurakhomonov, I.Y., Kohel, R.J., Saha, S., Pepper, A.E., Yu, J., Buriev, Z.T., Shermatov, S.E., Abdullaev, A.A., Kushanov, F.N., Jenkins, J.N., Scheffler, B.E., Abdukarimov, A. 2006. Linkage disequilibrium based association mapping of fiber quality traits in cotton using diverse cotton germplasm from Uzbekistan [abstract]. In: Proceedings of International Cotton Genome Initiative Workshop, Structural Genomics Session, September 18-20, 2006, Brasilia, Brazil. Paper No. 7. Available: http://icgi.tamu.edu/pdf/icgi06_abs_final.pdf.

ASSOCIATION OF ROOT-KNOT NEMATODE RESISTANCE GENES WITH SSR MARKERS ON TWO CHROMOSOMES IN COTTON - (Peer Reviewed Journal)

Ynturi, P., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Saha, S. 2006. Association of root-knot nematode resistance genes with simple sequence repeat markers on two chromosomes in cotton. Crop Science. 46:2670-2674.

CMD: A Cotton Microsatellite Database Resource for Gossypium Genomics - (Peer Reviewed Journal)

Blenda, A.V., Scheffler, J.A., Scheffler, B.E., Palmer, M., Lacape, J., Yu, J., Jesudraui, C., Jung, S., Muthukumar, S., Yellambalase, P., Ficklin, S., Staton, M., Eschelman, R., Ulloa, M., Saha, S., Burr, B., Lui, S., Zhang, T., Fang, D., Pepper, A.E., Kumpatla, S.P., Jacobs, J., Tomkins, J.P., Cantrell, R.G., Main, D. 2006. CMD: A Cotton Microsatellite Database Resource for Gossypium Genomics. Biomed Central (BMC) Genomics. 7:132.

EFFECTS OF CHROMOSOME 5SH FROM GOSSYPIUM HIRSUTUM L. ON FLOWER PRODUCTION IN G. HIRSUTUM L. - (Peer Reviewed Journal)

McCarty Jr., J.C., Wu, J., Saha, S., Jenkins, J.N., Hayes, R.W. 2006. Effects of chromosome 5sh from Gossypium hirsutum L. on flower production in G. hirsutum L. Euphytica. 152:99-107.

COMBINING ABILITY OF 13 GOSSYPIUM BARBADENSE L. CHROMOSOMES SUBSTITUTED INTO G. HIRSUTUM L. WHEN TOPCROSSED WITH FIVE DIVERSE CULTIVARS: YIELD AND YIELD COMPONENTS - (Peer Reviewed Journal)

Jenkins, J.N., Wu, J., McCarty Jr., J.C., Saha, S., Gutierrez, O.A., Hayes, R.W., Stelly, D.M. 2006. Genetic effects of thirteen Gossypium hirsutum L. chromosome substitution lines in topcrosses with upland cotton cultivars: I. Yield and yield components. Crop Science. 46:1169-1178.

SEQUENCE ANALYSIS OF SIX A-EXPANSIN GENES IN COTTON - (Abstract Only)

An, C., Saha, S., Jenkins, J.N., Scheffler, B.E., Wilkins, T.A. 2006. Chromosomal assignment of six alpha-expansin genes using SNP markers in cotton (Gossypium spp.). Beltwide Cotton Conferences. p. 737.

EFFECT OF CHROMOSOME SPECIFIC INTROGRESSION IN UPLAND COTTON ON FIBER AND AGRONOMIC TRAITS - (Peer Reviewed Journal)

Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Gutierrez, O.A., Percy, R.G., Cantrell, R.G., Stelly, D.M. 2006. Effects of chromosome-specific introgression in upland cotton on fiber and agronomic traits. Genetics. 172:1927-1938.

SSR-FACILITATED GOSSYPUM HIRSUTUM L. MARKER LOCALIZATION AND LINKAGE GROUP IDENTIFICATION USING INTERSPECIFIC HYPOANEUPLOID HYBRIDS - (Abstract Only)

Gutierrez, O.A., Saha, S., Jenkins, J.N., MCcarty Jr., J.C., Raska, D.A., Stelly, D.M. 2006. SSR-facilitated Gossypum hirsutum L. marker localization and linkage group identification using interspecific hypoaneuploid hybrids [abstract]. Plant and Animal Genome VX Conference Abstracts. CD-ROM.

CHARACTERIZAION OF G. HIRSUTUM WILD AND VARIETY ACCESSIONS FROM UZBEK COTTON GERMPLASM COLLECTION FOR MORPHOLOGICAL AND FIBER QUALITY TRAITS AND DATABASE DEVELOPEMENT - (Proceedings)

Abdurakhmonov, I.Y., Buriev, Z.T., Kohel, R.J., Yu, J., Pepper, A.E., Rizaeva, S.M., Abdukarimov, A., Saha, S., Jenkins, J.N. 2006. Characterizaion of G. hirsutum wild and variety accessions from Uzbek cotton germplasm collection for morphological and fiber quality traits and database developement. In: Proceedings of the Beltwide Cotton Conferences, January 3-6, 2006, San Antonio, Texas. 2006 CDROM.

MOLECULAR GENETIC DIVERSITY OF G. HIRSUTUM COTTON ACCESSION FROM UZBEK COTTON GERMPLASM REVEALED BY A CORE SET AND CHROMOSOME SPECIFIC MICROSATELLITE MARKERS - (Abstract Only)

Abdurakhmonov, I.Y., Kohel, R.J., Saha, S., Pepper, A.E., Yu, J., Buriev, T.Z., Shermatov, S., Abdullaev, A., Jenkins, J.N., Abdukarimov, A. 2006. Molecular genetic diversity of G. hirsutum cotton accession from Uzbek cotton germplasm revealed by a core set and chromosome specific microsatellite markers [abstract]. Proceedings of Plant and Animal Genome XIV Conference. Paper No. P131.

A NEW GENETIC MODEL TO DETERMINE CHROMOSOMAL EFFECTS IN CHROMOSOME SUBSTITUTION LINES AND OTHER GERMPLASMS - (Peer Reviewed Journal)

Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Stelly, D.M. 2006. An additive-dominance model to determine chromosomal effects in chromosome substitution lines and other germplasms. Theoretical and Applied Genetics. 112:391-399.

Simple sequence repeat marker associated with a natural leaf defoliation trait in tetraploid cotton - (Peer Reviewed Journal)

Abdurakhmonov, I.Y., Abdullaev, A.A., Saha, S., Buriev, Z.T., Arslanov, D., Kuryazov, Mavlonov, G., Rizaeva, S.M., Reddy, U.K., Jenkins, J.N., Abdullaev, A., Abdukarimov, A. 2005. Simple sequence repeat marker associated with a natural leaf defoliation trait in tetraploid cotton. Journal of Heredity. 96:644-653.

REGISTRATION OF 17 UPLAND (GOSSYPIUM HIRSUTUM) COTTON GERMLASM LINES DISOMIC FOR DIFFERENT G. BARBADENSE CHROMOSOME OR ARM SUBSTITUTIONS - (Peer Reviewed Journal)

Stelly, D.M., Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A. 2005. Registration of 17 upland (Gossypium hirsutum) cotton germplasm lines disomic for different G. barbadense chromosome or arm substitutions. Crop Science. 45:2663-2665.

IDENTIFICATION AND CHARACTERIZATION OF GENES PUTATIVELY RELATED TO COTTON FIBER QUALITY - (Peer Reviewed Journal)

Wu, Z., Soliman, K.M., Zipf, A., Saha, S., Sharma, G.C., Jenkins, J.N. 2005. Isolation and characterization of genes differentially expressed in fiber of Gossypium barbadense L. Journal of Cotton Science. 9:166-174.

COTTON FIBER CELLS ARE ARRESTED AT G1 STAGE - (Peer Reviewed Journal)

Saha, S., Van'T Hof, J. 2005. Cotton fiber cells are arrested at G1 stage. Journal of New Seeds. 7:1-8.

CHROMOSOMAL ASSIGNMENT OF BAC-DERIVED SSR MARKERS IN COTTON (GOSSYPIUM HIRSUTUM L.) - (Abstract Only)

Guo, Y., Saha, S., Yu, J., Jenkins, J.N., Kohel, R.J., Stelly, D.M. 2005. Chromosomal assignment of bac-derived SSR markers in cotton (Gossypium hirsutum L.) [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1067.

MOLECULAR AND CYTOLOGICAL CHARACTERIZATION OF A CYTOPLASMIC-SPECIFIC MUTANT IN PIMA COTTON (GOSSYPIUM BARBADENSE L.) - (Peer Reviewed Journal)

Karaca, M., Saha, S., Callahan, F.E., Jenkins, J.N., Read, J.J., Percy, R.G. 2004. Molecular and cytological characterization of a cytoplasmic-specific mutant in pima cotton (Gossypium barbadense L.). Euphytica. 139:187-197.

ASSOCIATION OF AGRONOMIC AND FIBER TRAITS WITH SPECIFIC 3-79 (GOSSYPIUM BARBADENSE) CHROMOSOMES IN A TM-1 (G. HIRSUTUM) BACKGROUND - (Peer Reviewed Journal)

Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Stelly, D.M., Percy, R.G., Raska, D.A. 2004. Effect of chromosome substitutions from Gossypium hirsutum L. 3-79 into G. hirsutum L. TM-1 on agronomic and fiber traits. Journal of Crop Science. 8:162-169.

CYTOGENETIC RESOURCES IN DISSECTING COMPLEX QTLS AND ENHANCING GERMPLASM IN UPLAND COTTON - (Abstract Only)

Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Percy, R.G., Cantrell, R.G., Stelly, D.M. 2004. Cytogenetic resources in dissecting complex QTLs and enhancing germplasm in upland cotton. International Cotton Genome Initiative ICG-2004 Workshop Proceedings. p. 81.

EVALUATION OF FIBER QUALITY AND OTHER AGRONOMIC TRAITS OF G. HIRSUTUM ACCESSIONS FROM UZBEK COTTON GERMPLASM - (Abstract Only)

Abdurakhmonov, I., Buriev, Z.T., Kohel, R.J., Yu, J., Pepper, A.E., Saha, S. 2004. Evaluation of fiber quality and other agronomic traits of G. hirsutum accessions from Uzbek cotton germplasm [abstract]. International Cotton Genome Initiative Workshop. p. 88.

CHROMOSOME SUBSTITUTION LINES FROM GOSSYPIUM BARBADENSE L. AS SOURCES FOR G HIRSUTUM L. IMPROVEMENT - (Proceedings)

Jenkins, J.N., McCarty Jr., J.C., Wu, J., Saha, S., Stelly, D. Chromosome substitution lines from Gossypium barbadense L. as sources for G. hirsutum L. improvement. In: Fisher, T., editor. Proceedings 4th International Crop Science Congress, September 26-October 1, 2004, Brisbane, Australia. 2004 CDROM.

Chromosomal assignment of RFLP linkage groups harboring important QTLs on an intraspecific cotton (Gossypium hirsutum L.) joinmap. - (Peer Reviewed Journal)

Ulloa, M., Saha, S., Jenkins, J.N., Meredith, Jr., W.R., McCarty, Jr., J.C., Stelly, D.M. 2005. Chromosomal assignment of RFLP linkage groups harboring important QTLs on an intraspecific cotton (Gossypium hirsutum L.) joinmap. Journal of Heredity. 96(2):132-144.

Biotechnology Symposium - In Memoriam, the Late Dr. Allan Zipf - (Proceedings)

Rajasekaran, K., Saha, S. (eds.) 2004. Biotechnology Symposium - In Memoriam, the Late Dr. Allan Zipf. 23 p.

CHROMOSOME SUBSTITUTION LINES: IMPORTANT GENOMIC RESOURCES IN COTTON - (Abstract Only)

Saha, S., Jenkins, J.N., McCarty, Jr., J.C., Wu, J., Gutierrez, O.A., Cantrell, R.G., Percy, R.G., Stelly, D.M. 2004. Chromosome substitution lines: important genomic resources in cotton. Biotechnology Symposium Proceedings, Alabama A&M University. CD-ROM.

NOTICE OF RELEASE OF 17 GERMPLASM LINES OF UPLAND (GOSSYPIUM HIRSUTUM) COTTON, EACH WITH A DIFFERENT PAIR OF G. BARBADENSE CHROMOSOMES OR ARMS SUBSTITUTED FOR THE RESPECTIVE G. HIRSUTUM CHROMOSOMES OR ARMS - (Germplasm Release)

Stelly, D.M., Raska, W., Jenkins, J.N., McCarty, J.C., Gutierrez, O.A. Notice of release of 17 germplasm lines of upland (Gossypium hirsutum) cotton, each with a different pair of G. barbadense chromosomes or arms substituted for the respective G. hirsutum chromosomes or arms. Official Release of USDA, ARS and Mississippi Agricultural and Forestry Experiment Station, 5/04/04.

EST-SSR: A NEW CLASS OF GENETIC MARKERS IN COTTON - (Peer Reviewed Journal)

Qureshi, S.N., Saha, S., Kantety, R.V., Jenkins, J.N. 2004. EST-SSR: A new class of genetic markers in cotton. Journal of Cotton Science. 8:112-123.

CHROMOSOME-SPECIFIC RESOURCES FOR GERMPLASM INTROGRESSION AND GENOMICS IN GOSSYPIUM - (Abstract Only)

Stelly, D.M., Saha, S., Raskal, D.A., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Percy, R.G., Gardunial, B., Dighel, N. 2004. Chromosome-specific resources for germplasm introgression and genomics in Gossypium [abstract]. Plant and Animal Genomes XII Conference Proceedings. Paper no. W187.

ESTABLISHMENT OF THE STANDARDIZED COTTON MICROSATELLITE DATABASE (CMD) PANEL - (Proceedings)

Yu, J., Kohel, R.J., Cantrell, R., Jones, D., Saha, S., Thomkins, J., Main, D., Palmer, M., Pepper, A., Stelly, D., Ulloa, M., Scheffler, J.A. 2004. Establishment of the standardized cotton microsatellite database (cmd) panel. In: Proceedings of the Beltwide Cotton Conferences, January 6-9, 2004, San Antonio, Texas. 2004 CDROM.

ORGANIZING COTTON GENOMICS THROUGH PHYSICAL MAPPING - (Abstract Only)

Stelly, D., Saha, S. 2004. Organizing cotton genomics through physical mapping [abstract]. Proceedings National Cotton Council Beltwide Cotton Conference. p.172.

NOTICE OF RELEASE OF FOURTEEN GERMPLASM LINES OF COTTON WHICH HAVE ONE PAIR OF CHROMOSOMES OR ARMS FROM G. BARBADENSE SUBSTITUTED FOR THE RESPECTIVE G. HIRSUTUM CHROMOSOME OR ARM - (Abstract Only)

Stelly, D.M., Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr, J.C., Gutierrez, O.A. 2004. Notice of release of 17 germplasm lines of upland (Gossypium hirsutum), each with a different pair of G. barbadense chromosomes or arms substituted for the respective G. hirsutum chromosomes or arms. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1205-1207.

SEGREGATION FOR ROOT-KNOT NEMATODE RESISTANCE GENE(S)IN F2 POPULATIONS FROM RESISTANT X SUSCEPTIBLE CROSSES - (Abstract Only)

Ynturi, P., Jenkins, J.N., McCarty Jr, J.C., Saha, S. 2004. Segregation for root-knot nematode resistance gene(s)in F2 populations from resistant x susceptible crosses [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1112.

EVALUATION OF G. HIRSUTUM EXOTIC ACCESSIONS FROM UZBEK COTTON GERMPLASM COLLECTION FOR FURTHER MOLECULAR MAPPING PURPOSES - (Proceedings)

Abdurakhmonov, I.Y., Abdullaev, A.A., Rizaeva, S.M., Buriev, Z.T., Adylova, A.T., Abdukarimov, A.A., Saha, S., Kohel, R.J., Pepper, A.E. 2004. Evaluation of G. hirsutum exotic accessions from Uzbek cotton germplasm collection for further molecular mapping purposes. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1133-1142.

MOLECULAR MAPPING OF NATURAL LEAF DEFOLIATION LOCI OF COTTON USING SSR MARKERS - (Abstract Only)

Abdurakhmonov, I.Y., Abdullaev, A.A., Buriev, Z.T., Rizaeva, S.M., Abdullaev, A.A., Abdukarimov, A.A., Saha, S., Reddy, U.K. 2004. Molecular mapping of natural leaf defoliation loci of cotton using SSR markers [abstract]. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1202.

SSR MARKER(S) ASSOCIATED WITH ROOT-KNOT NEMATODE RESISTANCE GENE(S) IN COTTON - (Peer Reviewed Journal)

Bezawada, C., Saha, S., Jenkins, J.N., Creech, R.C., McCarty, J.C. 2003. SSR marker(s) associated with root-knot nematode resistance gene(s) in cotton. Journal of Cotton Science. 7:179-184.

SOMATIC EMBRYO INITIATION AND GERMINATION IN DIPLOID COTTON (GOSSYPIUM ARBOREUM L.) - (Peer Reviewed Journal)

Sakhanokho, H.F., Zipf, A., Rajasekaran, K., Saha, S., Sharma, G.C., Chee, P.W. 2004. Somatic embryo initiation and germination in diploid cotton (Gossypium arboreum L.). In Vitro Plant. 40:177-181.

CHROMOSOMAL EFFECT ON FIBER AND AGRONOMIC TRAITS UTILIZING GOSSYPIUM BARBADENSE CHROMOSOME-SPECIFIC F2 HYBRID POPULATION OF G. HIRSUTUM - (Proceedings)

Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr, J.C., Gutierrez, O.A., Percy, R.G., Cantrell, R.G., Wu, J., Zhu, J., Stelly, D.M. 2004. Effect of chromosome on important quantitative traits of agronomic and fiber traits using Gossypium barbadense chromosome-specific recombinant lines of Gossypium hirsutum. World Cotton Research Conference Proceedings. p. 170-174.

MOLECULAR TAGGING OF FIBER YIELD GENES USING INTRASPECIFIC R1 LINES OF G. HIRSUTUM DEVELOPED IN UZBEKISTAN - (Proceedings)

Abdurakhmonov, I., Buriev, Z., Saha, S., Musaev, J., Almatov, A., Pepper, A.E., Reddy, O.U., Jenkins, J.N., Abdullaev, A., Abdukarimov, A. 2004. Molecular tagging of fiber yield genes using intraspecific R1 lines developed in Uzbekistan. World Cotton Research Conference Proceedings. p. 320-326.

SOMATIC EMBRYO INITIATION AND GERMINATION IN DIPLOID COTTON (GOSSYPIUM ARBOREUM L.) - (Peer Reviewed Journal)

Sakhanokho, H.F., Zipf, A., Rajasekaran, K., Saha, S., Sharma, G.C., Chee, P.W. 2004. Somatic embryo initiation and germination in diploid cotton (Gossypium arboreum L.). In Vitro Cellular and Developmental Biology-Plant. 40:177-181.

MOLECULAR DIVERSITY AMONG SWEETPOTATO GERMPLASM WITH HIGH AND LOW ALLELOPATHIC POTENTIAL USING SSRS AND AFLPS - (Abstract Only)

Reddy, U.K., Padmavathi, N., Saha, S., Besong, S., Saha, S., Jenkins, J.N., Bain, A.M., Peterson, J.K., Harrison Jr, H.F., Bohac, J. 2003. Molecular diversity among sweet potato germplasm with high and low allelopathic potential using SSRs and AFLPs [abstract]. Plant and Animal Genome Conference Proceedings. p. 696.

DI AND TRI NUCLEOTIDE REPEAT MOTIFS FOR MARKER DEVELOPMENT IN WATERMELON - (Abstract Only)

Reddy, U.K., Padmavathi, N., Saha, S., Katam, R., Saha, S., Jenkins, J.N., Thomas, C.E., Levi, A. 2003. Di and tri nucleotide repeat motifs for marker development in watermelon. Plant and Animal enome Conference Proceedings. p. 182.

ALLELIC PLASTICITY OF SIMPLE SEQUENCE REPEATS AMONG DOMESTICATED AND WILD SPECIES OF CAPSICUM - (Abstract Only)

Reddy, U.K., Padmavathi, N., Saha, S., Besong, S., Bates, G.T., Katam, R., Saha, S., Jenkins, J.N., Stommel, J.R., Quirin, E. 2003. Allelic plasticity of simple sequence repeats among domesticated and wild species of capsicum. Plant and Animal Genome Conference Proceedings. p. 523.

EST-SSR: USEFUL MARKERS FOR MOLECLAR MAPPING IN COTTON - (Abstract Only)

KATAM, R., QURESHI, S.N., WU, J., SAHA, S., JENKINS, J.N., MCCARTY JR, J.C., REDDY, U.K., KANTETY, R.V., ZHU, J. EST-SSR: USEFUL MARKERS FOR MOLECLAR MAPPING IN COTTON. CD-ROM. Proceedings Beltwide Cotton Conference. 2003. p. 884.

MOLECULAR CLONING, DIFFERENTIAL EXPRESSION, AND FUNCTIONAL CHARACTERIZATION OF A FAMILY OF CLASS I UBIQUITIN-CONJUGATING ENZYME (E2) GENES IN COTTON (GOSSYPIUM) - (Peer Reviewed Journal)

ZHANG, X., JENKINS, J.N., CALLAHAN, F.E., CREECH, R.G., SI, Y., MCCARTY JR, J.C., SAHA, S., MA, D. MOLECULAR CLONING, DIFFERENTIAL EXPRESSION, AND FUNCTIONAL CHARACTERIZATION OF A FAMILY OF CLASS I UBIQUITIN-CONJUGATING ENZYME (E2) GENES IN COTTON (GOSSYPIUM). BIOCHIMICA ET BIOPHYSICA ACTA. 2003. v.1625.p.269-279.

ISOLATION OF RESISTANCE GENE ANALOGS IN COTTON (GOSSYPIUM HIRSUTUM L.) BASED ON CONSERVED DOMAINS OF PLANT DISEASE RESISTANCE GENES - (Peer Reviewed Journal)

Tan, H., Callahan, F.E., Zhang, X.D., Karaca, M., Saha, S., Jenkins, J.N., Creech, R.G., Ma, D.P. 2003. Identification of resistance gene analogs in cotton (Gossypium hirsutum L.) Euphytica. 134:1-7.

A NOVEL METHOD FOR SCREENING COTTON CDNAS USING FLUOROCHROME-LABELED SSR-SPECIFIC PRIMERS - (Peer Reviewed Journal)

SAHA, S., KARACA, M., JENKINS, J.N., ZIPF, A., REDDY, U., PEPPER, A. Simple sequence repeats as useful resources to study transcribed genes of cotton. Euphytica. 2003. v.130.p.355-364.

GENETIC DIVERSITY AMONG FORAGE BERMUDAGRASS (CYNODON SPP.): EVIDENCE FROM CHLOROPLAST AND NUCLEAR DNA FINGERPRINTING - (Peer Reviewed Journal)

KARACA, M., SAHA, S., ZIPF, A.E., JENKINS, J.N., LANG, D.L. GENETIC DIVERSITY AMONG FORAGE BERMUDAGRASS (CYNODON SPP.): EVIDENCE FROM CHLOROPLAST AND NUCLEAR DNA FINGERPRINTING. CROP SCIENCE. 2002. V.42.P.2118-2127.

CHROMOSOME SUBSTITUTION LINES IN COTTON IMPROVEMENT - (Abstract Only)

Saha, S., Stelly, D.M., Gutierrez, O.A., Jenkins, J.N., McCarty Jr., J.C., Cantrell, R.G., Percy, R.G., Raska, D.A. 2002. Chromosome substitution lines in cotton improvement. Cotton Science. 14(S): 78.

DNA MARKERS LINKED TO LIGON LINTLESS (LI1) MUTANT IN COTTON - (Peer Reviewed Journal)

KARACA, M., SAHA, S., JENKINS, J.N., ZIPF, A., KOHEL, R.J., STELLY, D. Simple sequence repeat (SSR) markers linked to the ligon lintless (li1) mutant in cotton. JOURNAL OF HEREDITY. 2002. v.93.p.221-224.

GENETIC DISTANCE OF COTTON BASED ON SSR MARKERS AND ITS RELATIONSHIP WITH F2-HYBRID PERFORMANCE - (Peer Reviewed Journal)

GUTIERREZ, O.A., BASU, S., SAHA, S., JENKINS, J.N., SHOEMAKER, D.B., CHEATHAM, C.L., MCCARTY JR, J.C. GENETIC DISTANCE AMONG SELECTED GENOTYPES AND ITS RELATIONSHIP WITH F2 PERFORMANCE. CROP SCIENCE. 2002. V.42.P.1841-1847.

SEGREGATION OF DNA MARKERS AND THE DAY-NEUTRAL PHENOTYPE IN BACKCROSS POPULATIONS OF COTTON - (Peer Reviewed Journal)

Zhong, M., McCarty Jr, J.C., Jenkins, J.N., Saha, S. 2002. Assessment of day-neutral backcross populations of cotton using AFLP markers. Journal of Cotton Science. 6:97-103.

A NOVEL STRATEGY FOR GENERAL SUSTAINABILITY AND RESISTANCE MANAGEMENT IN PEST AND PATHOGEN RESISTANT CROPS - (Peer Reviewed Journal) - (31-Aug-00)

IMPROVED METHODS FOR SCREENING COTTON CDNAS USING FLUOROCHROME-LABELED AFLP- AND SSR-SPECIFIC PRIMERS - (Book / Chapter) - (12-Jun-00)

PREFACE OF BOOK ENTITLED "EMERGING TECHNOLOGIES IN THE GENETIC IMPROVEMENT OF COTTON" (BOOK EDITED BY JOHNIE N JENKINS AND SUKUMAR SAHA) - (Review Article) - (12-Jun-00)

MOLECULAR IDENTIFICATION OF CYTOPLASMIC-SPECIFIC TRANSCRIPTS IN COTTON - (Proceedings) - (01-Jun-00)

DETERMINATION OF DNA CONTENT AND GENOME IN CYNODON SPECIES BY FLOW CYTOMETRY - (Peer Reviewed Journal) - (29-Apr-00)

NEW DINUCLEOTIDE AND TRINUCLEOTIDE MICROSATELLITE RESOURCES FOR COTTON GENOME RESEARCH - (Peer Reviewed Journal)

REDDY, O.U., PEPPER, A.E., ABDURAKMONOV, I., SAHA, S., JENKINS, J.N., BROOKS, T., BOLEK, Y., EL-ZIK, K.M. NEW DINUCLEOTIDE AND TRINUCLEOTIDE MICROSATELLITE RESOURCES FOR COTTON GENOME RESEARCH. JOURNAL OF COTTON SCIENCE. 2000. V.5.P.103-113.

MOLECULAR IDENTIFICATION OF CYTOPLASMIC SPECIFIC TRANSCRIPTS IN COTTON - (Abstract Only) - (04-Jan-00)

INDUCTION OF HIGHLY EMBRYOGENIC CALLI AND PLANT REGENERATION IN DIPLOID AND TETRAPLOID COTTONS - (Abstract Only) - (04-Jan-00)

IDENTIFICATION OF LIGON LINTLESS-1 SPECIFIC TRANSCRIPTS IN COTTON - (Abstract Only) - (04-Jan-00)

GROWTH REGULATION OF COTTON FIBERS - (Book / Chapter) - (26-Jul-99)

GEL BASED DNA MARKER TECHNOLOGIES IN COTTON - (Peer Reviewed Journal) - (01-May-99)

MOLECULAR MARKER BASED GENETIC ANALYSIS OF QTL'S USING RECOMBINANT INBRED LINES IN COTTON - (Abstract Only) - (07-Jan-99)

GENETIC MECHANISM AND CHROMOSOMAL LOCATION OF POLLEN-SPECIFIC GENE(S) IN GOSSYPIUM - (Peer Reviewed Journal) - (09-Dec-98)

DNA FINGERPRINTING IN COTTON USING SSR PRIMERS FROM DIVERSE PLANT SPECIES - (Peer Reviewed Journal) - (03-Nov-98)

CHROMOSOMAL LOCATION OF RFLP MARKERS LINKED TO QTL IN COTTON - (Proceedings) - (01-Nov-98)

DNA MARKERS IN COTTON - (Abstract Only) - (09-Jan-98)

EFFECT OF LYOPHILIZATION OF COTTON TISSUE ON QUALITY OF EXTRACTABLE DNA, RNA, AND PROTEIN - (Peer Reviewed Journal) - (15-Sep-97)