Projects

PSEUDOMONAS SYSTEMS BIOLOGY Appropriated (D)   Accession Number: 423000

UNRAVELING THE INTERPLAY BETWEEN BACTERIAL EFFECTORS AND PLANT DEFENSES Specific Cooperative Agreement (S)   Accession Number: 422076

Publications (Clicking on the reprint icon will take you to the publication reprint.)

CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000 - (Peer Reviewed Journal)

Filiatrault, M.J., Stodghill, P., Wilson, J.M., Butcher, B.G., Chen, H., Meyers, C.R., Cartinhour, S.W. 2013. CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000. RNA Biology. 10(2):243-253.

Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000 - (Peer Reviewed Journal)

Filiatrault, M.J., Stodghill, P., Myers, C.R., Bronstein, P.A., Butcher, B.G., Lam, H., Grills, G., Schweitzer, P., Wang, W., Schneider, D.J., Cartinhour, S.W. 2011. Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000. PLoS One. 6(12). Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029335.

An ECF sigma factor mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores - (Peer Reviewed Journal)

Swingle, B.M., Markel, E.J., Maciak, C.L., Butcher, B., Myers, C., Stodghill, P., Cartinhour, S.W., Bao, Z. 2011. An ECF sigma factor mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores. Journal of Bacteriology. 193:5775-5783.

The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000 - (Abstract Only)

Filiatrault, M.J., Moll, S., Bao, Z., Maciak, C.L., Chen, H., Myers, C.R., Stodghill, P., Cartinhour, S.W. 2011. The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000. International Conference on Pseudomonas syringae Pathovars. 13:20.

Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000 - (Peer Reviewed Journal)

Butcher, B.G., Bronstein, P., Myers, C., Stodghill, P., Bolton, J.J., Markel, E.J., Filiatrault, M.J., Swingle, B.M., Gaballa, A., Helmann, J.D., Schneider, D.J., Cartinhour, S.W. 2011. Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000. Journal of Bacteriology. 193(18):4598-4611. Available: http://www.ncbi.nlm.nih.gov/pubmed/21784947.

Global survey of Fur binding refines the iron responsive regulon of Pseudomonas syringae - (Abstract Only)

Bronstein, P., Butcher, B.G., Myers, C.R., Stodghill, P., Swingle, B.M., Cartinhour, S.W. 2010. Global survey of Fur binding refines the iron responsive regulon of Pseudomonas syringae [abstract]. p. 31.

Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000 - (Peer Reviewed Journal)

Moll, S., Schneider, D.J., Stodghill, P., Myers, C.R., Cartinhour, S.W., Filiatrault, M.J. 2010. Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000. RNA Biology. 7(5):1-10.

Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies - (Abstract Only)

Filiatrault, M.J., Bronstein, P., Stodghill, P., Moll, S., Schneider, D.J., Cartinhour, S.W. 2010. Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies. Meeting Abstract. p. 31.

Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity - (Peer Reviewed Journal)

Filiatrault, M.J., Stodghill, P., Bronstein, P., Moll, S., Lindeberg, M., Grills, G., Schweitzer, P., Wang, W., Schroth, G., Luo, S., Khrebtukova, I., Thannhauser, T.W., Yang, Y., Butcher, B.G., Cartinhour, S.W., Schneider, D.J. 2010. Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity. Journal of Bacteriology. 192(9):2359-2372.

Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II - (Proceedings)

Filiatrault, M.J., Stodghill, P. 2009. Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II. American Phytopathological Society Abstracts.

High-throughput identification of transcriptional start sites in Pseudomonas syringae - (Abstract Only)

Filiatrault, M.J., Stodghill, P., Wang, W., Schweitzer, P., Grills, G., Cartinhour, S.W., Schneider, D.J. 2009. High-throughput identification of transcriptional start sites in Pseudomonas syringae. American Society for Microbiology. p. 251.

Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae - (Abstract Only)

Bronstein, P., Filiatrault, M.J., Stodghill, P., Schneider, D.J., Cartinhour, S.W. 2009. Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae. American Society for Microbiology. p. 20.

Characterization of two small RNAs of Pseudomonas syringae DC3000 - (Abstract Only)

Filiatrault, M.J., Bronstein, P., Stodghill, P., Cartinhour, S.W. 2008. Characterization of two small RNAs of Pseudomonas syringae DC3000. American Society for Microbiology Meeting.

Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome - (Abstract Only)

Filiatrault, M.J., Bronstein, P., Stodghill, P., Declerck, G.A., Schneider, D.J., Cartinhour, S.W. 2007. Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome. American Society for Microbiology Conference. p. 20.