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United States Department of Agriculture

Agricultural Research Service

Related Topics

Martin J Wubben
Genetics and Precision Agriculture Research
Research Molecular Geneticist

Phone: (662) 320-7585
Fax: (662) 320-7528
810 HIGHWAY 12 EAST
MISSISSIPPI STATE, MS, 39762

Projects
Genetic Enhancement of Cotton by Marker-Assisted and Conventional Breeding, and Introgression of Genes from Exotic Gossypium Species
Appropriated (D)
  Accession Number: 425254
Targeting Root-knot and Reniform Nematode Parasitism Genes to Develop Novel Resistance in Soybean
Reimbursable (R)
  Accession Number: 422294
Targeting Root-knot and Reniform Nematode Parasitism Genes to Develop Novel Resistance in Soybean
Specific Cooperative Agreement (S)
  Accession Number: 422629

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Molecular characterization of the reniform nematode C-type lectin gene family reveals a likely role in mitigating environmental stresses during plant parasitism Reprint Icon - (Peer Reviewed Journal)
Ganji, S., Jenkins, J.N., Wubben, M. 2014. Molecular characterization of the reniform nematode C-type lectin gene family reveals a likely role in mitigating environmental stresses during plant parasitism. Gene. 537:269-278.
Identification and characterization of a CLE domain-containing protein from Rotylenchulus reniformis - (Abstract Only)
Gavilano, L., Baum, T.J., Parrott, W.A., Davis, E.L., Wubben, M. 2013. Identification and characterization of a CLE domain-containing protein from Rotylenchulus reniformis. Proceedings Society of Nematologists, July 14-17, 2013, Knoxville, TN. CD ROM.
Nematode effector proteins: an emerging paradigm of parasitism - (Review Article)
Mitchum, M.G., Hussey, R.S., Davis, E.L., Baum, T.J., Wang, X., Elling, A.A., Wubben, M. 2013. Nematode effector proteins: an emerging paradigm of parasitism. New Phytologist. DOI: 10.1111/nph.12323.
De novo transcriptome assembly of the plant-parasitic nematode Rotylenchulus reniformis - (Abstract Only)
Showmaker, K.C., Ganji, S., Arick, M.A., Sanders, W.A., Magbunga, Z., Wubben, M., Peterson, D.G. 2013. De novo transcriptome assembly of the plant-parasitic nematode Rotylenchulus reniformis [abstract]. Midsouth Computational Biology and Bioinformatics Society. CD-ROM.
Two simple methods for the collection of individual life stages of reniform nematode, Rotylenchulus reniformis Reprint Icon - (Peer Reviewed Journal)
Ganji, S., Wubben, M., Jenkins, J.N. 2013. Two simple methods for the collection of individual life stages of reniform nematode, Rotylenchulus reniformis. Journal of Nematology. 45:87-91.
Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode - (Peer Reviewed Journal)
McCarty Jr., J.C., Jenkins, J.N., Wubben, M., Gutierrez, O.A., Hayes, R.W., Callahan, F.E., Deng, D.D. 2013. Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode. Journal of Plant Registrations. 7:220-223.
Over-expression of MIC3 reduces cotton susceptibility to root-knot nematode - (Abstract Only)
Wubben, M., Callahan, F.E., Jenkins, J.N., Velten, J.P. 2012. Over-expression of MIC3 reduces cotton susceptibility to root-knot nematode [abstract]. Society of Nematologists Conference. CD-ROM.
MiRNAs from cotton roots infected with Meloidogyne incognita - (Abstract Only)
Shapulatov, U.M., Abdusalom, M., Saha, S., Wubben, M., Jenkins, J.N., Buriev, Z.T., Ulloa, M., Scheffler, B.E., Abdurakhmonov, I.Y. 2012. MiRNAs from cotton roots infected with Meloidogyne incognita [abstract]. National Cotton Council Beltwide Cotton Conference. p. 730.
The Rotylenchulus reniformis genome: sequencing, assembly, and annotation - (Abstract Only)
Sanders, W.S., Showmaker, K., Bartlett, B., Wang, H., Ganji, S., Wubben, M., Mccarthy, F., Magbanua, Z., Peterson, D.G. 2012. The Rotylenchulus reniformis genome: sequencing, assembly, and annotation [abstract]. Plant and Animal Genome Conference. CD-ROM.
Sequencing and analysis of the Rotylenchulus reniformis transcriptome - (Abstract Only)
Showmaker, K., Sanders, W.S., Barlett, B., Wang, H., Ganji, S., Wubben, M., Mccarthy, F., Magbanua, Z., Peterson, D.G. 2012. Sequencing and analysis of the Rotylenchulus reniformis transcriptome [abstract]. Plant and Animal Genome Conference. CD-ROM.
Mic3 over-Expression Reduces Cotton Susceptibility to Root-Knot Nematode - (Abstract Only)
Wubben, M., Callahan, F.E., Jenkins, J.N., Velten, J.P. 2012. MIC3 over-expression reduces cotton susceptibility to root-knot nematode. Proceedings of 2012 Beltwide Cotton Conferences. CD-ROM.
Identification and characterization of C-type lectin genes from the reniform nematode - (Abstract Only)
Ganji, S., Wubben, M., Jenkins, J.N. 2012. Identification and characterization of C-type lectin genes from the reniform nematode. Proceedings of 2012 Beltwide Cotton Conferences. CD-ROM.
Registration of three germplasm lines of cotton derived from Gossypium hirsutum L. accession T2468 with moderate resistance to the reniform nematode Reprint Icon - (Germplasm Registration)
McCarty, Jr., J.C., Jenkins, J.N., Wubben, M., Hayes, R.W., Lafoe, M. 2012. Registration of three germplasm lines of cotton derived from Gossypium hirsutum L. accession T2468 with moderate resistance to the reniform nematode. Journal of Plant Registrations. 6:85-87.
SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Jenkins, J.N., McCarty Jr., J.C., Wubben, M.J., Hayes, R.W., Gutierrez, O.A., Callahan, F.E., Deng, D.D. 2012. SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.). Euphytica. 183:49-54.
Identification and Molecular Characterization of a Glycosyl Hydrolase Family 5 B-1,4-endoglucanase (Rr-eng-1) from the Reniform Nematode, Rotylenchulus reniformis Reprint Icon - (Peer Reviewed Journal)
Wubben, M.J, Ganji, S., Callahan, F.E. 2010. Identification and molecular characterization of a glycosyl hydrolase family 5 B-1,4-endoglucanase (Rr-eng-1) from the reniform nematode, Rotylenchulus reniformis. Journal of Nematology. 42:342-351.
Identification of QTL Regions and SSR Markers Associated with Resistance to Reniform Nematode in Gossypium barbadense L. accession GB713 - (Peer Reviewed Journal)
Gutierrez, O., Robinson, A.F., Jenkins, J.N., McCarty Jr., J.C., Wubben, M., Callahan, F.E., Nichols, R.L. 2011. Identification of QTL regions and SSR markers associated with resistance to reniform nematode in Gossypium barbadense L. accession GB713. Theoretical and Applied Genetics. 122:271-280.
Qtl Analysis of Resistance to Reniform Nematode in Gossypium Barbadense L. Accession Gb713 - (Abstract Only)
Gutierrez, O.A., Robinson, A.F., Jenkins, J.N., McCarty Jr, J.C., Wubben, M., Callahan, F.E. 2010. QTL analysis of resistance to reniform nematode in Gossypium barbadense L. accession GB713. Agronomy Abstracts, American Society of Agronomy, October 31-November 3, 2010, Longbeach, CA. CD ROM.
SSR markers closely associated with genes for resistance to root-knot nematode on chromosomes 11 and 14 of upland cotton - (Peer Reviewed Journal)
Gutierrez, O.A., Jenkins, J.N., McCarty Jr., J.C., Wubben, M., Hayes, R.W., Callahan, F.E. 2010. SSR markers closely associated with genes for resistance to root-knot nematode on chromosomes 11 and 14 of upland cotton. Theoretical and Applied Genetics. 121:1323-1337.
Isolation and characterization of a GHF5 b-1,4-endoglucanase from the reniform nematode (Rotylenchulus reniformis) - (Abstract Only)
Wubben, M., Callahan, F.E. 2010. Isolation and characterization of a GHF5 b-1,4-endoglucanase from the reniform nematode (Rotylenchulus reniformis). Proceedings of the 2010 Society of Nematology Conference. p. 118-119.
Transcript Analysis of Parasitic Females of the Sedentary Semi-Endoparasitic Nematode Rotylenchulus reniformis - (Peer Reviewed Journal)
Wubben, M., Callahan, F.E., Scheffler, B.E. 2010. Transcript Analysis of Parasitic Females of the Sedentary Semi-Endoparasitic Nematode Rotylenchulus reniformis. Molecular and Biochemical Parasitology. 172:31-40.
Transcript Analysis of Sedentary Parastic Female Reniform Nematodes (Rotylenchulus reniformis) Identifies Candidate Parasitism Genes and Targets for RNA-Interference - (Abstract Only)
Wubben, M., Callahan, F.E., Scheffler, B.E. 2010. Transcript analysis of sedentary parastic female reniform nematodes (Rotylenchulus reniformis) identifies candidate parasitism genes and targets for RNA-interference. Proceedings Plant and Animal Genome Conference. CD-ROM.
Phenotypic and molecular evaluation of cotton hairy roots as a model system for studying nematode interactions - (Peer Reviewed Journal)
Wubben, M., Callahan, F.E., Triplett, B.A., Jenkins, J.N. 2009. Phenotypic and Molecular Evaluation of Cotton Hairy Roots as a Model System for Studying Nematode Interactions. Plant Cell Reports. 28:1399-1409.
Role of phytohormones ethylene and auxin in plant-nematode interactions: mini-review - (Peer Reviewed Journal)
Gutierrez, O.A., Wubben, M., Howard, M., Roberts, B., Hanlon, E., Wilkinson, J.R. 2009. Role of phytohormones ethylene and auxin in plant-nematode interactions: mini-review. Russian Journal of Plant Physiology. 56:1-5.
Transcript analysis of sedentary female reniform nematodes identifies potential targets ofr RNAi-mediated resistance - (Abstract Only)
Wubben, M., Callahan, F.E., Scheffler, B.E., Jenkins, J.N. 2009. Transcript analysis of sedentary female reniform nematodes identifies potential targets ofr RNAi-mediated resistance [abstract]. National Cotton Council Beltwide Cotton Conference. p. 179.
Towards a genome sequence for reniform nematode (Rotylenchulus reniformis) - (Abstract Only)
Bartlett, B.D., Shan, X., Wubben, M., Jenkins, J.N., Peterson, D.G. 2008. Towards a genome sequence for reniform nematode (Rotylenchulus reniformis) [abstract]. Proceedings Tougaloo College-Mississippi College 5th Undergraduate Research Symposium, April 18, 2008, Tougaloo, MS.
Molecular characterization and temporal expression analyses indicate the MIC (Meloidogyne Induced Cotton) gene family represents a novel group of root-specific defense-related genes in Upland cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Wubben, M., Callahan, F.E., Hayes, R.W., Jenkins, J.N. 2008. Molecular characterization and temporal expression analyses indicate that the MIC (Meloidogyne Induced Cotton) gene family represents a novel group of root-specific defense-related genes in upland cotton (Gossypium hirsutum L.). Planta. 228:111-123.
Cyst nematode parasitism of Arabidopsis thaliana is inhibited by salicylic acid (SA) and elicits uncoupled SA-independent pathogenesis-related gene expression in roots - (Peer Reviewed Journal)
Wubben, M., Jing, J., Baum, T.J. 2008. Cyst nematode parasitism of Arabidopsis thaliana is inhibited by salicylic acid (SA) and elicits uncoupled SA-independent pathogenesis-related gene expression in roots. Molecular Plant-Microbe Interactions. 21:424-432.
Identification of transcripts induced during the cotton - root-knot nematode incompatible interaction by suppressive subtractive hybridization - (Abstract Only)
Wubben, M., Callahan, F.E. 2007. Identification of transcripts induced during the cotton - root-knot nematode incompatible interaction by suppressive subtractive hybridization [abstract]. Proceedings Plant and Animal Genome Conference. Available: http:\\www.intl-pag.org\is\abstracts\PAG15-P05r-656.
Root-knot and reniform nematode infection of cotton hairy roots - (Abstract Only)
Wubben, M., Callahan, F.E. 2007. Root-knot and reniform nematode infection of cotton hairy roots. National Cotton Council Beltwide Cotton Conference. p. 663.
Evidence of Clustering for the Mic-3 Root-Specific Gene Family Associated with Nematode Resistance in Gossypium Spp. - (Abstract Only)
Buriev, Z., Saha, S., Abdurakhmonov, I.Y., Jenkins, J.N., Abukarimov, A., Scheffler, B.E., Stelly, D.M., Wubben, M. 2006. Evidence of clustering for the mic-3 root-specific gene family associated with nematode resistance in gossypium spp [abstract]. American Society of Agronomy Abstracts. CDROM.
A Strategy for Developing Snp Markers for the Mic-3 Root-Specific Gene Family Associated with Nematode Resistance in Gossypium Spp. - (Abstract Only)
Buriev, Z., Saha, S., Abdurakhmonov, I.Y., Jenkins, J.N., Abdukarimov, A., Scheffler, B.E., Stelly, D.M., Wubben, M. 2006. A strategy for developing snp markers for the mic-3 root-specific gene family associated with nematode resistance in gossypium spp. [abstract]. Proceedings International Cotton Genome Initiative Conference. Available: http:\\cgi.tamu.edu\pds\icgi06-abs-final.
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Last Modified: 4/18/2014
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