Projects

Sugarbeet Germplasm Enhancement, Breeding, and Genetics Appropriated (D)   Accession Number: 414833

Control of Pathogens in Strawberry and Vegetable Production Systems Appropriated (D)   Accession Number: 412723

Methyl Bromide Alternatives for Weed and Disease Control in Strawberry Production Nonfunded Cooperative Agreement (N)   Accession Number: 417980

Rapid Detection and Soil Remediation for Verticillium Wilt in Strawberry. Reimbursable (R)   Accession Number: 415318

Sustainable Production of Strawberry and Ornamentals Without Methyl Bromide Reimbursable (R)   Accession Number: 414714

Development of a Systematic Approach for Marker Selection in Phytophthora Using Mitochondrial Genomic Sequences Reimbursable (R)   Accession Number: 411447

Global Phytophthora Network(gpn):a Cyberinfrastructure Linking Data, E-Tools and Human Capital for Monitoring and Management of Phytophthora Reimbursable (R)   Accession Number: 412062

Evaluation of Fumigant Efficacy in Strawberry Production Following Repeated Applications Specific Cooperative Agreement (S)   Accession Number: 409414

Publications

Standardizing the Nomenclature for Clonal Lineages of the Sudden Oak Death Pathogen, Phytophthora ramorum - (Peer Reviewed Journal)

Grunwald, N.J., Goss, E.M., Ivors, K., Garbelotto, M., Martin, F.N., Prospero, S., Hansen, E., Bonants, P., Hamelin, R., Chastagner, G., Werres, S., Rizzo, D.M., Abad, G., Beales, P., Bilodeau, G.J., Blomquist, C., Brasier, C., Briere, S., Chandelier, A., Davidson, J.M., Denman, S., Elliott, M., Fichtner, E.J., Frankel, S.J., Goheen, E.M., De Gruyter, H., Heungens, K., James, D., Kanaskie, A., Mcwilliams, M., Moralejo, E., Osterbauer, N.K., Palm, M.E., Parke, J.L., Shamoun, S.F., Shishkoff, N., Tooley, P.W., Vettraino, A., Webber, J., Widmer, T.L. 2009. Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum. Phytopathology. 99:792-795.

Comparison of Crop Rotation for Verticillium Wilt Management in Conventional and Organic Strawberry Production - (Peer Reviewed Journal)

Njoroge, S., Kabir, Z., Martin, F.N., Koike, S.T., Subbaro, K.V. 2009. COMPARISON OF CROP ROTATION FOR VERTICILLIUM WILT MANAGEMENT IN CONVENTIONAL AND ORGANIC STRAWBERRY PRODUCTION. Plant Disease 93:519-527.

Evaluation of molecular markers for Phytophthora ramorum detection and identification; testing for specificity using a standardized library of isolates. - (Peer Reviewed Journal)

Martin, F.N., Coffey, M., Berger, P., Hamelin, R.C., Tooley, P.W., Garbelotto, M., Hughes, K., Kubisiak, T. 2009. Evaluation of molecular markers for Phytophthora ramorum detection and identification; testing for specificity using a standardized library of isolates. Phytopathology 98:390-403.

Mitochondrial Genomics in the Peronosporales; Implications for Phylogenetics and Development of Molecular Markers - (Abstract)

Martin, F.N. 2009. Mitochondrial Genomics in the Peronosporales; Implications for Phylogenetics and Development of Molecular Markers. Phytopathology.

Pythium Genetics - (Book/Chapter)

Martin, F.N. (2009) Pythium Genetics. In: Oomycete Genetics and Genomics: Diversity, Plant and Animal Interactions, and Toolbox, Kurt Lamour and Sophien Kamoun eds. John Wiley & Sons, Hoboken, NJ. 574 pp.

Phytophthora Database: A forensic database supporting the identification and monitoring of Phytophthora - (Peer Reviewed Journal)

Park, J., Park, B., Veeraraghavan, N., Jung, K., Lee, Y., Blair, J.E., Geiser, D., Isard, S., Mansfield, M.A., Nikolaeva, E., Park, S., Kim, S.H., Greene, M., Ivors, K.L., Balci, Y., Peiman, M., Erwin, D.C., Coffey, M.D., Rossman, A.Y., Farr, D.F., Cline, E., Grunwald, N.J., Luster, D.G., Schrandt, J.K., Martin, F.N., Ribeiro, O.K., Makalowska, I., Kang, S. 2008. Phytophthora Database: A forensic database supporting the identification and monitoring of Phytophthora. Plant Disease. 92:966-972.

Methyl Bromide Alternatives for California Strawberry Nurseries - (Peer Reviewed Journal)

Fennimore, S.A., Duniway, J.M., Browne, G.T., Martin, F.N., Ajwa, H.A., Westerdahl, B.B., Goodhue, R.E., Haar, M., Winterbottom, C.Q. 2008. Methyl bromide alternatives for california strawberry nurseries. California Agriculture. April-June 2008:62-67

Management of Soilborne Diseases in Strawberry using Vegetable Rotation - (Peer Reviewed Journal)

Subbarao, K.V., Kabir, S., Martin, F.N., Koike, S.T. 2007. Management of Soilborne Diseases in Strawberry using Vegetable Rotation. Plant Disease. 91:964-972. DOI:10.1094/PDIS-91-8-0964

Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae - (Peer Reviewed Journal)

Martin, F.N., Bensasson, D., Tyler, B.M., Boore, J.L. 2007. Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae. Current Genetics 51:285-296. DOI 10.1007/s00294-007-0121-6

Molecular Detection of Phytophthora Ramorum by Real-Time Pcr Using Taqman, Sybr Green and Molecular Beacons with Three Genes - (Peer Reviewed Journal)

Bilodeau, G.J., Levesque, C.A., De Cook, A., Duchaine, C., Kristjansson, G., Uribe, P., Martin, F.N., Hamelin, R.C. 2007. Molecular detection of phytophthora ramorum by real-time pcr using taqman, sybr green and molecular beacons with three genes. Phytopathology 97:632-642. DOI:10.1094/PHYTO-97-5-0632

Genetic and Morphological Diversity of Temperate and Tropical Isolates of Phytophthora capsici - (Peer Reviewed Journal)

Bowers, J.H., Martin, F.N., Tooley, P.W., Luz, E. 2007. Genetic and Morphological Diversity of Temperate and Tropical Isolates of Phytophthora capsici. Phytopathology 97:492-503. DOI:10.1094/PHYTO-97-4-0492

Dose Response of Weed Seeds and Soil-Borne Fungi Pathogens to 1,3-D and Chloropicrin - (Peer Reviewed Journal)

Klose, S., Ajwa, H.A., Fennimore, S.A., Martin, F.N., Browne, G., Subbarao, K.V. 2006. Dose response of weed seeds and soil-borne fungi pathogens to 1,3-d and chloropicrin. Crop Protection. 26(2007):535-542 DOI:10.1016/j.cropro.2006.05.004

Plant Pathogen Culture Collections: It Takes a Village to Preserve These Resources Vital to the Advancement of Agricultural Security and Plant Pathology - (Review Article)

Kang, S., Blair, J.E., Geiser, D.M., Khang, C., Park, S., Gahegan, M., O Donnell, K., Luster, D.G., Kim, S.H., Ivors, K.L., Lee, Y., Lee, Y., Grunwald, N.J., Martin, F.N., Coffey, M.D., Veeraraghavan, N., Makalowska, I. 2006. Plant pathogen culture collections: It takes a village to preserve these resources vital to the advancement of agricultural security and plant pathology. Phytopathology. 96:920-925.

Real-Time Fluorescent Pcr Detection of the Sudden Oak Death Pathogen, Phytophthora Ramorum, Using Mitochondrial Gene Regions - (Peer Reviewed Journal)

Tooley, P.W., Martin, F.N., Carras, M.M., Frederick, R.D. 2006. Real-time fluorescent pcr detection of the sudden oak death pathogen, phytophthora ramorum, using mitochondrial gene regions. Phytopathology. 95:336-345.

Evaluation of Fungicides for Controlling Bottom Rot of Iceberg Lettuce, 2001 and 2002 - (Peer Reviewed Journal)

Koike, S.T., Martin, F.N. 2005. Evaluation of fungicides for controlling bottom rot of iceberg lettuce, 2001 and 2002. Fungicide and Nematocide Reports 60:V150.

Alternatives to Methyl Bromide for Strawberry Runner Plant Production - (Peer Reviewed Journal)

Kabir, Z., Fennimore, S., Duniway, J., Martin, F.N., Browne, G.T., Winterbottom, C., Ajwa, H.A., Westerdahl, B.B., Goodhue, R.E., Haar, M.J. 2005. Alternatives to methyl bromide for strawberry runner plant production. Hortscience. 40(6):1709-1715.

The Use of Mitochondrial DNA for Clarifying Phylogenetic Relationships and Isolate Identification with the Genus Phytophthora - (Abstract)

Martin, F.N., Tooley, P.W. 2005. The use of mitochondrial dna for clarifying phylogenetic relationships and isolate identification with the genus phytophthora. Meeting Abstract. No page numbers.

Mitochondrial Genome Organization in Phytophthora; What P. Infestans, P. Ramorum and P. Sojae Tell Us. - (Abstract)

Martin, F.N. 2005. Mitochondrial genome organization in Phytophthora; what P. infestans, P. ramorum and P. sojae tell us [Abstract]. Proceedings of Phytophthora Molecular Genetics Network Workshop. Abstract p.9.

Alternative Fumigation Strategies in California Strawberry Production and the Use of Remote Sensing for Evaluating Their Effect on Crop Production. - (Abstract)

Martin, F.N. Alternative fumigation strategies in california strawberry production and the use of remote sensing for evaluating their effect on crop production. Phytopathology. 2004. v. 94. p. S133.

The Use of Mitochondrial DNA for Clarifying Phylogenetic Relationships and Isolate Identification with the Genus Phytophthora. - (Abstract)

Martin, F.N., Tooley, P.W. The use of mitochondrial dna for clarifying phylogenetic relationships and isolate identification with the genus phytophthora. Phytopathology. 2004. v. 94 p. S66.

Identification of Phytophthora Isolates to Species Level Using Rflp Analysis of a Pcr Amplified Region of Mitochondrial DNA - (Peer Reviewed Journal)

Martin, F.N., Tooley, P.W. 2004. Identification of phytophthora isolates to species level using rflp analysis of a pcr amplified region of mitochondrial dna. Phytopathology. v. 94. p. 983-991.

Real-Time Fluorescent Pcr Detection of the Sudden Oak Death Pathogen Phytophthora Ramorum - (Abstract)

Mycologia 55:37

Molecular Detection of Phytophthora Ramorum and a Phytophthora Ilicis-Like Species Associated with Sudden Oak Death in California - (Peer Reviewed Journal)

Martin, F.N., Tooley, P.W., Blomquist, C. 2004. Molecular detection of phytophthora ramorum and a phytophthora ilicis-like species associated with sudden oak death in california. Phytopathology. v. 94. p. 621-631.

Phylogenetic Relationships of Phytophthora Ramorum and a Phytophthora Ilicis-Like Species Associated with Sudden Oak Death in California - (Peer Reviewed Journal)

Martin, F.N., Tooley, P.W. 2003. Phylogenetic relationships of phytophthora ramorum and a phytophthora ilicis-like species associated with sudden oak death in california. Mycological Research. v. 107. p. 1379-1391.

Genetic Diversity of Temperate and Tropical Isolates of Phytophthora Capsici - (Abstract)

Bowers, J.H., Bailey, B.A., Martin, F.N. 2003. Genetic diversity of temperate and tropical isolates of phytophthora capsici [abstract]. American Phytopathological Society Annual Meeting.

Using Remote Sensing for Evaluating the Efficacy of Alternative Fumigation Strategies in California Strawberry Production. - (Abstract)

Martin, F.N. 2003. Using remote sensing for evaluating the efficacy of alternative fumigation strategies in california strawberry production.. American Phytopathological Society Annual Meeting.

Development of a Molecular Marker System for Detection of Phytophthora Spp. and Diagnosis of Species Associated with Sudden Oak Death in California. - (Abstract)

Martin, F.N., Tooley, P.W., Frederick, R.D. 2003. Development of a molecular marker system for detection of phytophthora spp. and diagnosis of species associated with sudden oak death in california.. American Phytopathological Society Annual Meeting. Phytopathology v. 93. p. S58.

Development of Alternative Strategies for Management of Soilborne Pathogens Currently Controlled with Methyl Bromide. - (Book/Chapter)

Martin, F.N. 2003. Development of alternative strategies for management of soilborne pathogens currently controlled with methyl bromide. Annual Review of Phytopathology.

Strawberry Production with Alternative Fumigants Applied Through Drip Irrigation Systems. - (Proceedings/Symposium)

AJWA, H.A., TROUT, T.J., FENNIMORE, S., WINTERBOTTOM, C., MARTIN, F.N., DUNIWAY, J., BROWNE, G.T., WESTERDAHL, B., GOODHUE, R., GUERRERO, L. 2002. STRAWBERRY PRODUCTION WITH ALTERNATIVE FUMIGANTS APPLIED THROUGH DRIP IRRIGATION SYSTEMS.. PROCEEDINGS OF INTERNATIONAL RESEARCH CONFERENCE ON METHYL BROMIDE ALTERNAT. 2002 Annual International Research Conference on Methyl Bromide Alternatives and Emissions Reductions, November 6-8, 2002, pp 14-1.

Alternative Fumigants for Control of Soil Pests: Strawberry As a Model System - (Proceedings/Symposium) - (01-Oct-01)