Projects

MOLECULAR APPROACHES FOR THE IDENTIFICATION AND CHARACTERIZATION OF ANTIMICROBIAL RESISTANCE IN FOODBORNE PATHOGENS Appropriated (D)   Accession Number: 422276

Publications (Clicking on the reprint icon will take you to the publication reprint.)

Genetic Mechanisms of antimicrobial resistance in Salmonella enterica, Escherichia coli, and Enteroccocus spp. isolated from U.S. food animals - (Review Article) - (07-May-13)

Salmonella - (Book / Chapter) - (03-Feb-13)

Pathogenicity of Dodecyltrimethylammonium Chloride-Resistant Salmonella enterica - (Peer Reviewed Journal)

Kautz, M.J., Dvorzhinskiy, A., Frye, J.G., Stevenson, N., Herson, D.S. 2013. Pathogenicity of Dodecyltrimethylammonium Chloride-Resistant Salmonella enterica. Applied and Environmental Microbiology. 79(7):2371-2376.

The intestinal fatty acid propionate inhibits Salmonella invasion through the post-translational control of HilD - (Peer Reviewed Journal)

Hung, C., Garner, C.D., Slauch, J.M., Dwyer, Z.W., Lawhon, S.D., Frye, J.G., Ahmer, B.M., Altier, C. 2013. The intestinal fatty acid propionate inhibits Salmonella invasion through the post-translational control of HilD. Molecular Microbiology. 87(5):1045-1060.

Antimicrobial resistance genes in multi-drug resistant Salmonella enterica isolated from animals, retail meats, and humans in the U.S. and Canada - (Peer Reviewed Journal) - (20-Dec-12)

Analysis of antimicrobial resistance mechanisms in MDR bacteria by microarray and high-throughput sequencing - (Abstract Only)

Frye, J.G. 2012. Analysis of antimicrobial resistance mechanisms in MDR bacteria by microarray and high-throughput sequencing. International Conference of the Korean Society of Veterinary Science. November 1-2, 2012. Seoul, Republic of Korea.

Comparison of dkgB-linked Intergenic Sequence Ribotyping to DNA Microarray Hydridization for Assigning Sterotype to Salmonella enterica. - (Peer Reviewed Journal)

Guard, J.Y., Sanchez-Ingunza, R., Morales, C., Stewart, T.E., Liljebjelke, K., Van Kessel, J.S., Ingram, K.D., Jones, D.R., Jackson, C.R., Cray, P.J., Frye, J.G., Gast, R.K., Hinton Jr, A. 2012. Comparison of dkgB-linked Intergenic Sequence Ribotyping to DNA Microarray Hydridization for Assigning Sterotype to Salmonella enterica. FEMS Microbiology Letters. 337(1):61-72.

Microarray analysis of Salmonella Enteritidis Phage Type 8 treated with subinhibitory concentrations of trans-cinnamaldehyde or eugenol - (Abstract Only)

Kollanoor-Johny, A., Frye, J.G., Porwolik, S., Darre, M.J., Donoghue, A.M., Donoghue, D.J., Mcclelland, M., Venkitanarayanan, K. 2012. Microarray analysis of Salmonella Enteritidis Phage Type 8 treated with subinhibitory concentrations of trans-cinnamaldehyde or eugenol [abstract]. Poultry Science. 91(Suppl.1):76-77..

Characteristics of plasmids in multi-drug-resistant enterobacteriaceae isolated during prospective surveillance of a newly opened hospital in Iraq - (Peer Reviewed Journal)

Huang, X., Frye, J.G., Chahine, M.A., Glenn, L.M., Ake, J.A., Su, W., Nikolich, M.P., Lesho, E.P. 2012. Characteristics of plasmids in multi-drug-resistant enterobacteriaceae isolated during prospective surveillance of a newly opened hospital in Iraq. PLoS One. 7(7):1-8.e40360. doi: 10.1371/journal.pone.0040360.

Analysis of antimicrobial resistance genes detected in multiple-drug-resistant Escherichia coli isolates from broiler chicken carcasses - (Peer Reviewed Journal)

Glenn, L.M., Englen, M.D., Lindsey, R.L., Frank, J.F., Turpin, J.E., Berrang, M.E., Meinersmann, R.J., Cray, P.J., Frye, J.G. 2012. Analysis of antimicrobial resistance genes detected in multiple-drug-resistant Escherichia coli isolates from broiler chicken carcasses. Microbial Drug Resistance. 18(4):453-463.

Analysis and comparison of antimicrobial resistance mechanisms and plasmids found in multi-drug resistant (MDR) Salmonella enterica and Escherichia coli - (Abstract Only)

Frye, J.G., Hiott, L.M., Barrett, J.B., Glenn, L.M., Englen, M.D., Jackson, C.R. 2012. Analysis and comparison of antimicrobial resistance mechanisms and plasmids found in multi-drug resistant (MDR) Salmonella enterica and Escherichia coli. American Society for Microbiology 112th General Meeting, June 16-19, 2012, San Francisco, California. p. 143.

Analysis of antimicrobial resistance mechanisms in multi-drug resistant (MDR) Salmonella enterica by high-throughput DNA sequencing - (Abstract Only)

Frye, J.G., Hiott, L.M., Barrett, J.B., Glenn, L.M., Englen, M.D., Jackson, C.R., Cray, P.J. 2012. Analysis of antimicrobial resistance mechanisms in multi-drug resistant (MDR) Salmonella enterica by high-throughput DNA sequencing. International Conference on Emerging Infectious Diseases, March 11-14, 2012, Atlanta, Georgia. p.180.

Analysis of Campylobacter jejuni whole-genome DNA microarrays: Significance of prophage and hypervariable regions for discriminating isolates - (Peer Reviewed Journal)

Pittenger, L.G., Frye, J.G., Mcnerney, V., Reeves, J., Haro, J.H., Cray, P.J., Harrison, M.A., Englen, M.D. 2012. Analysis of Campylobacter jejuni whole-genome DNA microarrays: Significance of prophage and hypervariable regions for discriminating isolates. Foodborne Pathogens and Disease. 9(5):473-479.

Molecular analysis of imipenem-resistant Acinetobacter baumannii isolated from US service members wounded in Iraq, 2003–2008 - (Peer Reviewed Journal)

Huang, X., Chahine, M.A., Frye, J.G., Cash, D.M., Lesho, E.P., Craft, D.W., Lindler, L.E., Nikolich, M.P. 2012. Molecular analysis of imipenem-resistant Acinetobacter baumannii isolated from US service members wounded in Iraq, 2003–2008. Epidemiology and Infection. 140(12):2302-2307.

Gene expression analysis of Salmonella enterica Enteritidis NalR and Salmonella enterica Kentucky 3795 exposed to HCl and acetic acid in rich medium - (Peer Reviewed Journal)

Joerger, R.D., Sartori, C., Frye, J.G., Turpin, J.B., Schmidt, C., Mcclelland, M., Porwollik, S. 2012. Gene expression analysis of Salmonella enterica Enteritidis NalR and Salmonella enterica Kentucky 3795 exposed to HCl and acetic acid in rich medium. Foodborne Pathogens and Disease. 9(4):331-337.

Molecular methods for serotyping and detecting salmonella - (Abstract Only)

Frye, J.G. 2011. Molecular methods for serotyping and detecting salmonella. Delmarva Poultry, Inc. October 12-13,2011. Ocean City, MD.

Hydrogen-Stimulated carbon acquisition and conservation in salmonella enterica serovar typhimurium - (Peer Reviewed Journal)

Lamichhane-Khadka, R., Frye, J.G., Porwollik, S., Mcclelland, M., Maier, R.J. 2011. Hydrogen-Stimulated carbon acquisition and conservation in salmonella enterica serovar typhimurium. Journal of Bacteriology. 193(20):5824-5832.

Microarray-based analysis of IncA/C Plasmid-Associated genes from multidrug-resistant Salmonella enterica - (Peer Reviewed Journal)

Lindsey, R.L., Frye, J.G., Cray, P.J., Meinersmann, R.J. 2011. Microarray-based analysis of IncA/C Plasmid-Associated genes from multidrug-resistant Salmonella enterica. Applied and Environmental Microbiology. 77(19):6991-6999.

Application of microarray technology for microbial source tracking - (Book / Chapter)

Frye, J.G. 2012. Application of microarray technology for microbial source tracking. In: Foley, S.L., Nayak, R., Johnson, T.J., Shukla, S.K., editors. Molecular Typing Methods for Tracking Foodborne Microorganisms. New York, NY: Nova Science Publishers. p. 319-340.

Analysis of Antimicrobial Resistance Genes in Multiple Drug Resistant (MDR) Salmonella enterica Isolated from Animals and Humans - (Abstract Only)

Glenn, L.M., Lindsey, R.L., Boerlin, P., Gilmour, M.W., Harbottle, H., Cray, P.J., Frye, J.G. 2011. Analysis of Antimicrobial Resistance Genes in Multiple Drug Resistant (MDR) Salmonella enterica Isolated from Animals and Humans. American Society for Microbiology General Meeting. pg. 161. Poster# 2016.

Analysis of antimicrobial resistance genes and plasmids from commensal Escherichia coli - (Abstract Only)

Lindsey, R.L., Frye, J.G., Thitaram, S.N., Cray, P.J., Englen, M.D. 2011. Analysis of antimicrobial resistance genes and plasmids from commensal Escherichia coli. American Society for Microbiology General Meeting. p. 121.

Hydrogen-Stimulated Gene Expression by Salmonella enterica serovar Typhimurium in a Carbon Limited Environment - (Abstract Only)

Lamichlane-Khadka, R., Frye, J.G., Maier, R.J. 2011. Hydrogen-Stimulated Gene Expression by Salmonella enterica serovar Typhimurium in a Carbon Limited Environment. 111th General Meeting of the American Society for Microbiology. May 21-24,2011. New Orleans,LA. CDROM.

Molecular characteristics of Multidrug Resistant Acinetobacter baumannii Isolates from US soldiers from Iraq at the National Naval Medical Center - (Abstract Only)

Huang, X.Z., Chahine, M.A., Frye, J.G., Cash, D.M., Summer, A.M., Lesho, E.P., Craft, D.W., Lindler, L.E., Nikolich, M.P. 2011. Molecular characteristics of Multidrug Resistant Acinetobacter baumannii Isolates from US soldiers from Iraq at the National Naval Medical Center. 111th General Meeting American Society for Microbiology. May 21-24,2011. New Orleans, LA.

Genomic analysis and Next Generation Sequencing (NGS) of MDR plasmids in Salmonella enterica - (Abstract Only)

Frye, J.G. 2011. Genomic analysis and Next Generation Sequencing (NGS) of MDR plasmids in Salmonella enterica. New Frontiers in Molecular Epidemiology II. April 26-28,2011. Decatur, GA.

Population genetics of multi-drug resistant (MDR) IncA/C plasmid in Salmonella enterica isolated from animals - (Abstract Only)

Frye, J.G., Lindsey, R.L., Glenn, L.M., Cray, P.J., Meinersmann, R.J. 2011. Population genetics of multi-drug resistant (MDR) IncA/C plasmid in Salmonella enterica isolated from animals. Bioinformatics and Science Symposium on Population-Level Genetic Diversity. March 25, 2011. Santa Fe, NM.

Salmonella enterica genomics and genetics of antimicrobial resistance - (Abstract Only)

Frye, J.G. 2011. Salmonella enterica genomics and genetics of antimicrobial resistance. Distinguished Guest Seminar in Biosciences. March 23, 2011. Los Alamos, NM.

Analysis of Campylobacter jejuni whole genome DNA microarrays: significance of prophage and hypervariable regions for discriminating isolates - (Abstract Only)

Pittenger, L., Frye, J.G., Lindsey, R.L., McNemey, V., Reeves, J., Cray, P.J., Harrison, M.A., Englen, M.D. 2011. Analysis of Campylobacter jejuni whole genome DNA microarrays: significance of prophage and hypervariable regions for discriminating isolates. International Association for Food Protection Annual Meeting. July 31 - August 3, 2011. Milwaukee, WI.

Evaluation of pyrosequencing for assembly of plasmids carrying IS elements - (Abstract Only)

Chen, C., Lindsey, R.L., Strobaugh Jr, T.P., Frye, J.G., Bono, J.L., Smith, T.P., Meinersmann, R.J. 2011. Evaluation of pyrosequencing for assembly of plasmids carrying IS elements [abstract]. 111th ASM General Meeting.

Analysis of antimicrobial resistance genes detected in multidrug-resistant salmonella enterica serovar typhimurium isolated from food animals - (Peer Reviewed Journal)

Glenn, L.M., Lindsey, R.L., Frank, J.F., Meinersmann, R.J., Englen, M.D., Cray, P.J., Frye, J.G. 2011. Analysis of antimicrobial resistance genes detected in multidrug-resistant salmonella enterica serovar typhimurium isolated from food animals. Microbial Drug Resistance. 17(3):407-418.

Sequence analysis of a group of low molecular-weight plasmids carrying multiple IS903 elements flanking a kanamycin resistance aph gene in Salmonella enterica serovars - (Peer Reviewed Journal)

Chen, C., Strobaugh Jr, T.P., Lindsey, R.L., Frye, J.G., Uhlich, G.A. 2011. Sequence analysis of a group of low molecular-weight plasmids carrying multiple IS903 elements flanking a kanamycin resistance aph gene in Salmonella enterica serovars. Plasmid Journal. 65:246-252.

Characterization of multidrug-resistant Escherichia coli by antimicrobial resistance profiles, plasmid replicon typing, and pulsed-field gel electrophoresis - (Peer Reviewed Journal)

Lindsey, R.L., Frye, J.G., Thitaram, S.N., Meinersmann, R.J., Cray, P.J., Englen, M.D. 2011. Characterization of multidrug-resistant Escherichia coli by antimicrobial resistance profiles, plasmid replicon typing, and pulsed-field gel electrophoresis. Microbial Drug Resistance. 17(2):157-163.

Related antimicrobial resistance genes detected in different bacterial species co-isolated from swine fecal samples - (Peer Reviewed Journal)

Frye, J.G., Lindsey, R.L., Meinersmann, R.J., Berrang, M.E., Jackson, C.R., Englen, M.D., Turpin, J.B., Cray, P.J. 2011. Related antimicrobial resistance genes detected in different bacterial species co-isolated from swine fecal samples. Foodborne Pathogens and Disease. 8(6):663-679.

DNA microarray detection of antimicrobial resistance genes in Detection and Characterization of Antibiotic Resistance - (Book / Chapter) - (29-Oct-10)

Genotypic and Phenotypic Correlations of Multidrug-Resistant Acinetobacter baumannii-A. calcoaceticus Complex Strains Isolated from Patients at the National Naval Medical Center - (Peer Reviewed Journal)

Huang, X., Frye, J.G., Chahine, M.A., Cash, D.M., Barbe, M.G., Babel, B.S., Kasper, M.R., Whitman, T.J., Lindler, L.E., Bowden, R.A. 2010. Genotypic and Phenotypic Correlations of Multidrug-Resistant Acinetobacter baumannii-A. calcoaceticus Complex Strains Isolated from Patients at the National Naval Medical Center. Journal of Clinical Microbiology. 48(11):4333-4336.

Prevalence of ColE1-like plasmids and kanamycinr resistance genes in Salmonella enterica serotypes - (Peer Reviewed Journal)

Chen, C., Lindsey, R.L., Strobaugh Jr, T.P., Meinersmann, R.J., Frye, J.G. 2010. Prevalence of ColE1-like plasmids and kanamycin resistance genes in Salmonella enterica serotypes. Applied and Environmental Microbiology. doi:10.1186/1471-2180-10-207.

Genetic characterization of antimicrobial resistance and virulence genes in “emerging” Salmonella Javiana from humans - (Abstract Only)

Nayak, R., Deck, J., Frye, J.G., Foley, S., Stefanova, R. 2010. Genetic characterization of antimicrobial resistance and virulence genes in “emerging” Salmonella Javiana from humans. American Society for Microbiology Conference. Toronto, Canada. P.36. Poster B-2.

Molecular analysis of plasmid encoded multi-drug resistance (MDR) in Salmonella enterica animal isolates by PFGE, replicon typing, and DNA microarray screening followed by high-throughput DNA sequencing - (Abstract Only)

Lindsey, R.L., Frye, J.G., Bono, J.L., Smith, T.P., Harhay, D.M., Cray, P.J., Meinersmann, R.J. 2010. Molecular analysis of plasmid encoded multi-drug resistance (MDR) in Salmonella enterica animal isolates by PFGE, replicon typing, and DNA microarray screening followed by high-throughput DNA sequencing. American Society for Microbiology. June 8-11, 2010. Toronto, Canada. B16. p41-42.

Genetic Variability in Multi-Drug Resistant Salmonella Newport Associated with Dairy Cattle and S. Kentucky Associated with Poultry - (Abstract Only)

Turpin, J.B., Cray, P.J., Frye, J.G. 2010. Genetic Variability in Multi-Drug Resistant Salmonella Newport Associated with Dairy Cattle and S. Kentucky Associated with Poultry. American Society for Microbiology. May 23-27, 2010. San Diego, CA. CD ROM. Z-973.

Microarray analysis of Inc A/C Plasmids in a population of Multidrug resistant Salmonella enterica - (Abstract Only)

Lindsey, R.L., Cray, P.J., Frye, J.G., Meinersmann, R.J. 2010. Microarray analysis of Inc A/C Plasmids in a population of Multidrug resistant Salmonella enterica. American Society for Microbiology. May 23-27, 2010. San Diego, CA. Poster #A-2502.

Development of Microarray and Multiplex Polymerase Chain Reaction Assays for Identification of Serovars and Virulence Genes in Salmonella enterica of Human or Animal Origin - (Peer Reviewed Journal)

Peterson, G., Gerdes, B., Berges, J., Nagaraja, T.G., Frye, J.G., Boyle, D.S., Narayanan, S. 2010. Development of Microarray and Multiplex Polymerase Chain Reaction Assays for Identification of Serovars and Virulence Genes in Salmonella enterica of Human or Animal Origin. Journal of Veterinary Diagnostic Investigation. 22(4):559-569.

FDA Bioinformatics Tool for Microbial Genomics Research on Molecular Characterization of Bacterial Foodborne Pathogens Using Microarrays - (Proceedings)

Fang, H., Xu, J., Ding, D., Jackson, S.A., Patel, I.R., Frye, J.G., Zou, W., Nayak, R., Foley, S., Chen, J. 2010. FDA Bioinformatics Tool for Microbial Genomics Research on Molecular Characterization of Bacterial Foodborne Pathogens Using Microarrays. BMC Bioinformatics. 11(Suppl 6):S4:1-11.

Analysis of Antimicrobial Resistance Genes in Multiple Drug Resistant (MDR) Escherichia coli Isolated from Broiler Chicken Carcasses - (Abstract Only)

Glenn, L.M., Lindsey, R.L., Cray, P.J., Frye, J.G. 2010. Analysis of Antimicrobial Resistance Genes in Multiple Drug Resistant (MDR) Escherichia coli Isolated from Broiler Chicken Carcasses. American Society for Microbiology. May 23 - 27, 2010. San Diego, CA. Poster#A-1012.

Salmonella enterica Genomics and Antimicrobial Resistance - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Berrang, M.E., Meinersmann, R.J. 2010. Salmonella enterica Genomics and Antimicrobial Resistance. University of Georgia, Department of Food Science and Technology. March 4, 2010. Athens, GA.

Distribution of ColE1-like KAN-resistance plasmids in a population of Salmonella enterica from animal diagnostic samples - (Abstract Only)

Chen, C., Lindsey, R.L., Strobaugh Jr, T.P., Frye, J.G., Meinersmann, R.J. 2010. Distribution of ColE1-like KAN-resistance plasmids in a population of Salmonella enterica from animal diagnostic samples [abstract]. 1:1.

Microarray based analysis of Inc A/C Plasmids in Multidrug resistant Salmonella enterica - (Abstract Only)

Lindsey, R.L., Cray, P.J., Frye, J.G., Welch, T.J., Meinersmann, R.J. 2010. Microarray based analysis of Inc A/C Plasmids in Multidrug resistant Salmonella enterica. USDA Annual Food Safety Research Planning Meeting. February 16-19, 2010. Shepherdstown, WV.

The rise and fall of salmonella enteritidis in poultry: implications for human health - (Abstract Only)

Cray, P.J., Cox Jr, N.A., Frye, J.G., Richardson, L.J., Haro, J.H. 2010. The rise and fall of salmonella enteritidis in poultry: implications for human health. Annual Conference of Antimicrobial Resistance. February 1-3, 2010. Bethesda, Maryland. P10. 79.

An oligonucleotide microarray to characterize multidrug resistant plasmids - (Peer Reviewed Journal)

Lindsey, R.L., Frye, J.G., Cray, P.J., Welch, T.J., Meinersmann, R.J. 2010. An oligonucleotide microarray to characterize multidrug resistant plasmids. Journal of Microbiological Methods. 81(2):96-100.

Characterization of Small ColE1-Like Plasmids Conferring Kanamycin Resistance in Salmonella enterica subsp. enterica serovars Typhimurium and Newport - (Peer Reviewed Journal)

Chen, C., Strobaugh Jr, T.P., Frye, J.G. 2010. Characterization of Small ColE1-Like Plasmids Conferring Kanamycin Resistance in Salmonella enterica subsp. enterica serovars Typhimurium and Newport. Plasmid Journal. 63:150-154.

Fitness Costs and Stability of a High-Level Ciprofloxacin Resistance Phenotype in Salmonella enterica Serotype Enteritidis: Reduced Infectivity Associated with Decreased Expression of Salmonella Pathogenicity Island 1 Genes - (Peer Reviewed Journal)

O'Regan, E., Quinn, T., Frye, J.G., Pages, J., Porwollik, S., Cray, P.J., Mcclelland, M., Fanning, S. 2010. Fitness Costs and Stability of a High-Level Ciprofloxacin Resistance Phenotype in Salmonella enterica Serotype Enteritidis: Reduced Infectivity Associated with Decreased Expression of Salmonella Pathogenicity Island 1 Genes. Antimicrobial Agents and Chemotherapy. 54(1):367-374.

Sensitivity and selectivity of cultivation methods to recovery a specific Salmonella serogroup from hatchery plenum samples - (Abstract Only)

Cox Jr, N.A., Richardson, L.J., Cray, P.J., Cason Jr, J.A., Mauldin, J.M., Guard, J.Y., Frye, J.G., Ingram, K.D., Hinton Jr, A., Buhr, R.J. 2009. Sensitivity and selectivity of cultivation methods to recovery a specific Salmonella serogroup from hatchery plenum samples [abstract]. International Poultry Scientific Forum. January 26 - 27, 2009. Atlanta, GA.

Analysis of Antimicrobial Resistance Genes Detected in MDR Salmonella enterica Serovar Typhimurium animal isolates from the National Antimicrobial Resistance Monitoring System - (Abstract Only)

Frye, J.G., Glenn, L.M., Jackson, C.R., Cray, P.J. 2009. Analysis of Antimicrobial Resistance Genes Detected in MDR Salmonella enterica Serovar Typhimurium animal isolates from the National Antimicrobial Resistance Monitoring System. American Society for Microbiology Conference. 155A:84-85.

Molecular Characterization of Salmonella enterica and detection of antimicrobial resistance genes - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Berrang, M.E., Meinersmann, R.J. 2009. Molecular Characterization of Salmonella enterica and detection of antimicrobial resistance genes [abstract]. National Poultry Improvement Plan Salmonella Workshop. 6:1-21.

Molecular characteristics of Multidrug Resistant Acinetobacter baumannii Isolates from US soldiers from Iraq at the National Naval Medical Center - (Abstract Only)

Huang, X.Z., Frye, J.G., Babel, B., Myers, T., Whitman, T., Barber, M., Lindler, L.E., Bowden, R.A., Nikolich, M.P. 2009. Molecular characteristics of Multidrug Resistant Acinetobacter baumannii Isolates from US soldiers from Iraq at the National Naval Medical Center. Interscience Conference on Antimicrobial Agents & Chemotherapy Proceedings. September 12-15,2009. San Francisco, CA.

Development of a DNA microarray to detect antimicrobial resistance genes identified in the national center for biotechnology information database - (Peer Reviewed Journal)

Frye, J.G., Lindsey, R.L., Rondeau, G., Porwollik, S., Long, F., Mcclelland, M., Jackson, C.R., Englen, M.D., Meinersmann, R.J., Berrang, M.E., Davis, J.A., Barrett, J.B., Turpin, J.B., Thitaram, S.N., Cray, P.J. 2010. Development of a DNA microarray to detect antimicrobial resistance genes identified in the national center for biotechnology information database. Microbial Drug Resistance. 16(1):9-19.

Analysis of antimicrobial resistance genes detected in Campylobacter coli, Enterococcus spp., Escherichia coli and Salmonella enterica isolated from the same animal sample - (Abstract Only)

Frye, J.G., Jackson, C.R., Englen, M.D., Meinersmann, R.J., Berrang, M.E., Cray, P.J. 2009. Analysis of antimicrobial resistance genes detected in Campylobacter coli, Enterococcus spp., Escherichia coli and Salmonella enterica isolated from the same animal sample [abstract]. American Society for Microbiology. May 17 - 21, 2009. Philadelphia, PA. A-051.

ANTIMICROBIAL RESISTANCE IN SALMONELLA ISOLATES RECOVERED FROM EGGS - (Abstract Only)

Cray, P.J., Cox Jr, N.A., Musgrove, M.T., Frye, J.G., Richardson, L.J., Plumblee, J., Haro, J.H., Anandaraman, N. 2009. Antimicrobial Resistance in Salmonella Isolates Recovered from Eggs. Egg Industry Center 2009 Egg Industry Issues Forum. April 8, 2009. Des Moines, IA. 9-10.

Salmonella enterica Genomics and Antimicrobial Resistance - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Berrang, M.E., Meinersmann, R.J. 2009. Salmonella enterica Genomics and Antimicrobial Resistance. University of Georogia, Microbiology Departmental Seminar. April 2,2009. Athens, GA.

Multi-Drug Resistance among Salmonella spp. Isolated from Food Animals - (Abstract Only)

Fedorka-Cray, P.J., Jackson, C.R., Frye, J.G., Haro, J. McGlinchey, B., Hall, M.C., Gresham, C., Plumblee, J.R., Cray, W.C., Narang, N. Multi-Drug Resistance among Salmonella spp. Isolated from Food Animals [abstract]. Conference on Food Safety and Public Health Frontier: Minimizing Antibiotic Resistance Transmission through the Food Chain. April 2-3, 2009, Arlington, Virginia. P. 15.

Sensitive and rapid molecular detection assays for Salmonella enterica serovar Typhimurium and Heidelberg - (Peer Reviewed Journal)

Mccarthy, N., Reen, F., Buckley, J.F., Frye, J.G., Boyd, E., Gilroy, D. 2009. Sensitive and rapid molecular detection assays for Salmonella enterica serovar Typhimurium and Heidelberg. Journal of Food Protection. 72(11):2350-2357.

Prevalence, species distribution and antimicrobial resistance of enterococci isolated from dogs and cats in the United States - (Peer Reviewed Journal)

Jackson, C.R., Cray, P.J., Davis, J.A., Barrett, J.B., Frye, J.G. 2009. Prevalence, species distribution and antimicrobial resistance of enterococci isolated from dogs and cats in the United States. Journal of Applied Microbiology. 107(4):1269-1278.

Typing and characterization of ColE1-like plasmids conferring kanamycin resistance in Salmonella enterica serotypes - (Abstract Only)

Chen, C., Lindsey, R.L., Strobaugh Jr, T.P., Frye, J.G., Cray, P.J., Meinersmann, R.J. 2009. Typing and characterization of ColE1-like plasmids conferring kanamycin resistance in Salmonella enterica serotypes. Meeting Abstract. Poster Z048.

Inc A/C Plasmids in Multidrug resistant Salmonella enterica - (Abstract Only)

Lindsey, R.L., Cray, P.J., Frye, J.G., Meinersmann, R.J. 2009. Inc A/C Plasmids in Multidrug resistant Salmonella enterica [abstract]. American Society for Microbiology. May 17-21,2009. Philadelphia, PA. A-092.

Epidemiology, ecology, and molecular genetics of antimicrobial resistance in pathogenic and commensal bacteria from food animals - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Meinersmann, R.J., Berrang, M.E. 2009. Epidemiology, ecology, and molecular genetics of antimicrobial resistance in pathogenic and commensal bacteria from food animals. ARS Food Safety and Inspection Service Research Workshop. February 17-19, 2009. Shepherdstown, WV.

Genomic Analysis of Antimicrobial Resistant Commensal and Food Borne Pathogens Isolated from Animals - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Meinersmann, R.J., Berrang, M.E. 2009. Genomic Analysis of Antimicrobial Resistant Commensal and Food Borne Pathogens Isolated from Animals. ARS Food Safety and Inspection Service Research Workshop. Feburary 17-19, 2009. Shepherdstown, WV.

Genotyping Campylobacter jejuni by comparative genome indexing: an evaluation with pulsed-field gel electrophoresis and flaA SVR sequencing - (Peer Reviewed Journal)

Pittenger, L.G., Englen, M.D., Parker, C., Frye, J.G., Quinones, B., Horn, S.T., Son, I., Cray, P.J., Harrison, M.A. 2009. Genotyping Campylobacter jejuni by comparative genome indexing: an evaluation with pulsed-field gel electrophoresis and flaA SVR sequencing. Foodborne Pathogens and Disease. 6(3):337-349.

High-throughput Molecular Determination of Salmonella enterica Serovars Use of Multiplex PCR and Capillary Electrophoresis Analysis - (Peer Reviewed Journal)

Leader, B.T., Frye, J.G., Hu, J., Cray, P.J., Boyle, D.S. 2009. High-throughput Molecular Determination of Salmonella enterica Serovars Use of Multiplex PCR and Capillary Electrophoresis Analysis. Journal of Clinical Microbiology. 47(5):1290-1299.

Salmonella enterica Strains with Reduced Susceptibility to Quarternary Ammonium Compounds - (Abstract Only)

Stevenson, N., Mierswa, M., Dvorzhinskiy, A., Frye, J.G., Herson, D. 2009. Salmonella enterica Strains with Reduced Susceptibility to Quarternary Ammonium Compounds. American Society for Microbiology. A029.

Microarray Analysis of Antimicrobial Resistance Genes in Salmonella enterica from Preharvest Poultry Environment - (Peer Reviewed Journal)

Zou, W., Frye, J.G., Chang, C., Liu, J., Cerniglia, C.E., Nayak, R. 2009. Microarray Analysis of Antimicrobial Resistance Genes in Salmonella enterica from Preharvest Poultry Environment. Journal of Applied Microbiology. 107(3):906-914.

Inc A/C Plasmids are Prevalent in Multidrug-Resistant Salmonella enterica Isolates - (Peer Reviewed Journal)

Lindsey, R.L., Cray, P.J., Frye, J.G., Meinersmann, R.J. 2009. Inc A/C Plasmids are Prevalent in Multidrug-Resistant Salmonella enterica Isolates. Applied and Environmental Microbiology. 75(7):1908-1915.

Presence of the KPC carbapenemase gene in Enterobacteriaceae causing bacteremia, and the correlation with in vitro carbapenem susceptibility - (Peer Reviewed Journal)

Marschall, J., Tibbetts, R.J., Dunne, W., Frye, J.G., Fraser, V.J., Warren, D.K. 2009. Presence of the KPC carbapenemase gene in Enterobacteriaceae causing bacteremia, and the correlation with in vitro carbapenem susceptibility. Journal of Clinical Microbiology. 47(1):239-241.

A Multiplex PCR Method for the Rapid Serotyping of Common Clinical Isolates of Salmonella - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2008. A Multiplex PCR Method for the Rapid Serotyping of Common Clinical Isolates of Salmonella. American Association of Veterinary Laboratory Diagnosticians. October 28, 2008. Reno, Nevada.

Animal NARMS Surveillance Data - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2008. Animal NARMS Surveillance Data. United States Animal Health Association Proceedings. October 26, 2008. Greensboro, NC.

Extended Spectrum Beta-lactam Resistance among Salmonella - (Abstract Only)

Frye, J.G., Whichard, J., Cray, P.J., Jackson, C.R., Englen, M.D. 2008. Extended Spectrum Beta-lactam Resistance among Salmonella. United States Animal Health Association Proceedings. October 26, 2008. Greensboro, NC.

Salmonella Newport as Reported by the Animal Arm of the National Antimicrobial Resistance Monitoring System – Enteric Bacteria (NARMS) 1997-2007 - (Abstract Only)

Cray, P.J., Frye, J.G., Jackson, C.R., Anandaraman, N., Plumblee, J., Haro, J.H., Mcglinchey, B. 2008. Salmonella Newport as Reported by the Animal Arm of the National Antimicrobial Resistance Monitoring System – Enteric Bacteria (NARMS) 1997-2007. International Association for Food Protection. November 19-21, 2008. Lisbon, Portugal. P17.

Analysis of Salmonella enterica with reduced susceptibility to the 3rd generation cephalosporin, ceftriaxone, isolated from US cattle during 2000-2004 - (Peer Reviewed Journal)

Frye, J.G., Fedorka-Cray, P.J., Jackson, C.R., Rose, M. 2008. Analysis of salmonella enterica with reduced susceptibility to the third-generation cephalosporin ceftriaxone isolated from U.S. cattle during 2000-2004. Microbial Drug Resistance. 14(4):251-258.

Characterization of Antimicrobial Resistance Determinants among Salmonella, Campylobacter, Escherichia, and Enterococcus using PCR and Microarray Approaches - (Abstract Only)

Fry, P., Abley, M., Kaydos-Daniels, S., Cray, P.J., Frye, J.G., Wondwossen, G. 2008. Characterization of Antimicrobial Resistance Determinants among Salmonella, Campylobacter, Escherichia, and Enterococcus using PCR and Microarray Approaches. Interscience Conference on Antimicrobial Agents & Chemotherapy Proceedings. October 25 - 28, 2008. Washington, DC. CD - ROM. C2 - 3926.

Rapid multiplex PCR and Real-Time TaqMan PCR assays for detection of Salmonella enterica and the highly virulent serovars Choleraesuis and Paratyphi C - (Peer Reviewed Journal)

Woods, D.F., Reen, F., Gilroy, D., Buckley, J., Frye, J.G., Boyd, E. 2008. Rapid multiplex PCR and Real-Time TaqMan PCR assays for detection of Salmonella enterica and the highly virulent serovars Choleraesuis and Paratyphi C. Journal of Clinical Microbiology. 46(12):4018-4022.

Detection of KPC-2 in a Clinical Isolate of Proteus mirabilis and First Reported Description of Carbapenemase Resistance Caused by a KPC Beta-Lactamase in P. mirabilis - (Peer Reviewed Journal)

Tibbetts, R., Frye, J.G., Dunne, W. Detection of KPC-2 in a Clinical Isolate of Proteus mirabilis and First Reported Description of Carbapenemase Resistance Caused by a KPC Beta-Lactamase in P. mirabilis. Journal of Clinical Microbiology. 46(9):3080-3083.

ACSSuT Multi-Drug Resistance Among Salmonella Isolates of Animal Origin - (Abstract Only)

Cray, P.J., Frye, J.G., Haro, J.H. 2008. Acssut multi-drug resistance among salmonella isolates of animal origin. International Conference on Emerging Antimicrobial Agents in Veterinary Medicine. August 24-28,2008. Prague, Czech Republic. 44.

Detection of antimicrobial resistance genes by DNA microarray - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Berrang, M.E., Meinersmann, R.J. 2008. Detection of antimicrobial resistance genes by DNA microarray. Walter Reed Army Institute of Research. May 15, 2008. Silver Springs, Maryland.

Rainfall and tillage effects on transport of fecal bacteria and sex hormones 17ß-estradiol and testosterone from broiler litter applications to a Georgia Piedmont Ultisol - (Peer Reviewed Journal)

Jenkins, M., Truman, C.C., Siragusa, G.R., Line, J.E., Bailey, J.S., Frye, J.G., Endale, D.M., Franklin, D.H., Schomberg, H.H., Fisher, D.S., Sharpe, R.R. 2008. Rainfall and tillage effects on transport of fecal bacteria and sex hormones 17ß-estradiol and testosterone from broiler litter applications to a Georgia Piedmont Ultisol. Science of the Total Environment. 403(1-3):154-163.

Analysis of Campylobacter jejuni Whole Genome DNA Microarrays to Identify Gene Differences for Use in Strain Subtyping - (Abstract Only)

Englen, M.D., Pittenger, L.G., Frye, J.G., Reeves, J., Mcnerney, V., Cray, P.J., Harrison, M.A. 2008. Analysis of Campylobacter jejuni Whole Genome DNA Microarrays to Identify Gene Differences for Use in Strain Subtyping. American Society for Microbiology General Meeting. CD-ROM P-049.

Rapid Molecular Determination of Serotype from Clinical Isolates of Salmonella Enterica - (Abstract Only)

Boyle, D.S., Leader, B.T., Frye, J.G., Russell, D., Cray, P.J., Hu, J. 2008. Rapid Molecular Determination of Serotype from Clinical Isolates of Salmonella Enterica. Proceedings of the International Conference on Emerging Infectious Diseases.(325)184-185.

Development of a Rapid Multiplex PCR Technique for Determination of Salmonella enterica Serotypes Isolated from Pork and Poultry - (Abstract Only)

Frye, J.G., Leader, B.T., Cray, P.J., Hu, J., Boyle, D.S. 2008. Development of a Rapid Multiplex PCR Technique for Determination of Salmonella enterica Serotypes Isolated from Pork and Poultry. American Society for Microbiology Annual Meeting. CD-ROM. C-294.

Antimicrobial Resistance in Salmonella Isolates Recovered from Cattle at Slaughter - (Abstract Only)

Cray, P.J., Frye, J.G., Rose, M., Anandaraman, N., Haro, J.H. 2008. Antimicrobial Resistance in Salmonella Isolates Recovered from Cattle at Slaughter. Proceedings of the International Conference on Emerging Infectious Diseases. (79)92.

Development of a High-Throughput Multiplex PCR and Capillary Electrophoresis Technique for Serotype Determination of Salmonella Enterica Food Animal Isolates - (Abstract Only)

Frye, J.G., Leader, B.T., Cray, P.J., Hu, J., Boyle, D.S. 2008. Development of a High-Throughput Multiplex PCR and Capillary Electrophoresis Technique for Serotype Determination of Salmonella Enterica Food Animal Isolates. Proceedings of the International Conference on Emerging Infectious Diseases. March 16-19, 2008. Atlanta, GA. 184.

Analysis of AI-2/LuxS dependent transcriptional profiling in Campylobacter jejuni 81-176 - (Peer Reviewed Journal)

He, Y., Frye, J.G., Strobaugh Jr, T.P., Chen, C. 2008. Ai-2/luxs dependent transcriptional profiling in campylobacter jejuni 81-176. Foodborne Pathogens and Disease. 5(4):399-415.

Antimicrobial resistance and virulence of Enterococcus faecalis isolated from retail food - (Peer Reviewed Journal)

Mcgowan-Spicer, L., Cray, P.J., Frye, J.G., Meinersmann, R.J., Barrett, J.B., Jackson, C.R. 2008. Antimicrobial resistance and virulence of Enterococcus faecalis isolated from retail food. Journal of Food Protection. 71(4):760-769.

Research careers for microbiologists in the USDA Agricultural Research Service - (Proceedings)

Frye, J.G. 2007. Research careers for microbiologists in the USDA Agricultural Research Service. University of Georgia Department of Microbioloby Career Panel. December 04, 2007. Athens, Georgia.

In vitro susceptibility of bovine Salmonella enterica to cefquinome and cefepime in the U.S. - (Abstract Only)

Cray, P.J., Frye, J.G., Haro, J.H., Rose, M. In vitro susceptibility of bovine Salmonella enterica to cefquinome and cefepime in the U.S. [abstract]. 2nd Symposium on Antimicrobial Resistance in Animals and the Environment. 27.

Application of Microarray Technology to Investigate Salmonella genomics - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2007. Application of Microarray Technology to Investigate Salmonella genomics. University of Delaware Department of Animal and Food Sciences Seminar. October 1, 2007. Newark, Delware.

Detection of Salmonella enterica subpopulations by phenotype microarray antibiotic resistance patterns - (Peer Reviewed Journal)

Bouldin, J.G., Morales, C., Frye, J.G., Gast, R.K., Musgrove, M.T. 2007. Detection of Salmonella enterica subpopulations by phenotype microarray antibiotic resistance patterns. Applied and Environmental Microbiology. 73(23):7753-7756.

Microarray Analysis of Quorum-Sensing Regulated Gene Expression in Campylobacter jejuni - (Abstract Only)

He, Y., Frye, J.G., Chen, C. 2007. Microarray Analysis of Quorum-Sensing Regulated Gene Expression in Campylobacter jejuni. Meeting Abstract.

Susceptibility of Listeria monocytogenes, L. innocua, and L. welshimeri Isolated from Various Sources to Antibiotics - (Abstract Only)

Davis, J.A., Jackson, C.R., Bailey, J.S., Berrang, M.E., Frye, J.G., Englen, M.D., Meinersmann, R.J., Cray, P.J. 2007. Susceptibility of Listeria monocytogenes, L. innocua, and L. welshimeri Isolated from Various Sources to Antibiotics [abstract]. Interscience Conference on Antimicrobial Agents & Chemotherapy Proceedings. 225 p.124 E-2085.

SALMONELLA, CAMPYLOBACTER AND ENTEROCOCCUS SPP., THEIR ANTIMICROBIAL RESISTANCE PROFILES AND THEIR SPATIAL RELATIONSHIPS IN A SYNOPTIC STUDY OF THE UPPER OCONEE RIVER BASIN - (Peer Reviewed Journal)

Meinersmann, R.J., Berrang, M.E., Jackson, C.R., Cray, P.J., Ladely, S.R., Little, E., Frye, J.G., Mattsson, B. 2007. Salmonella, campylobacter and enterococcus spp., their antimicrobial resistance profiles and their spatial relationships in a synoptic study of the upper oconee river basin. Microbial Ecology. 55(3):444-452.

Salmonella research in the Bacterial Epidemiology and Antimicrobial Resistance Research Unit at ARS - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Bailey, J.S., Berrang, M.E., Meinersmann, R.J. 2007. Salmonella research in the Bacterial Epidemiology and Antimicrobial Resistance Research Unit at ARS. Cornell Institute of Food Science Summer Scholar Program. July 17, 2009. Ithica, NY.

Insights into the complex regulation of rpoS in Borrelia burgodorferi - (Peer Reviewed Journal)

Burtnick, M.N., Downey, J., Brett, P.J., Boylan, J.A., Frye, J.G., Hoover, T.R., Gherardini, F.C. 2007. Insights into the complex regulation of rpoS in Borrelia burgodorferi. Molecular Microbiology. 65(2):277-293.

Prevalence, Distribution and Characterization of Ceftiofur Resistance in Salmonella enterica Isolated from Animals in the U.S. from 1999 to 2003 - (Peer Reviewed Journal)

Frye, J.G., Cray, P.J. 2007. Prevalence, Distribution and Characterization of Ceftiofur Resistance in Salmonella enterica Isolated from Animals in the U.S. from 1999 to 2003. International Journal of Antimicrobial Agents. 30(2):134-142.

Salmonella Newport as Reported by the Animal Arm of the National Antimicrobial Resistance Monitoring System Enteric Bacteria (NARMS) - (Abstract Only)

Cray, P.J., Bailey, J.S., Jackson, C.R., Frye, J.G., Haro, J.H., Mcglinchey, B., Plumblee, J. 2007. Salmonella Newport as Reported by the Animal Arm of the National Antimicrobial Resistance Monitoring System Enteric Bacteria (NARMS). International Association for Food Protection. T8-01:112.

USDA Data on Antimicrobial Resistance - (Abstract Only)

Cray, P.J., Bailey, J.S., Frye, J.G., Jackson, C.R., Englen, M.D., Plumblee, J., Haro, J.H. 2007. Usda data on antimicrobial resistance. American Association of Veterinary Pharmacology & Therapeutics. May 20-24, 2007. Monterey, CA.

DNA Micorarrays for Genotyping and Population Studies of Campylobacter jejuni - (Abstract Only)

Pittenger, L.G., Englen, M.D., Frye, J.G., Mcnerney, V., Reeves, J., Gay, K.R., Cray, P.J., Harrison, M.A. 2007. Dna micorarrays for genotyping and population studies of campylobacter jejuni. International Association for Food Protection. P5-07:224-225.

Antimicrobial resistance in Salmonella isolates recovered from swine: A NARMS report - (Proceedings)

Cray, P.J., Dargatz, D.A., Anandaraman, N., Wineland, N.E., Frye, J.G., Bailey, J.S. 2007. Antimicrobial resistance in Salmonella isolates recovered from swine: A NARMS report. Safepork. 7:510-513.

Salmonella attribution and clonal dissemination - (Proceedings)

Frye, J.G., Boyle, D.S., Kim, S., Gautom, R., Hu, J., Cray, P.J. 2007. Salmonella attribution and clonal dissemination. USDA Annual Food Safety Research Planning Meeting. February 21-23,2007. Shepherdstown, WV.

Molecular subtyping methods for campylobacter - (Proceedings)

Frye, J.G., Englen, M.D., Meinersmann, R.J., Cray, P.J. 2007. Molecular subtyping methods for campylobacter. USDA Annual Food Safety Research Planning Meeting. February 21-23, 2007. Shepherdstown, WV.

Genetic Resistance-ease of acquisition and role of commensals - (Proceedings)

Frye, J.G., Jackson, C.R., Cray, P.J. 2007. Genetic Resistance-ease of acquisition and role of commensals. USDA Annual Food Safety Research Planning Meeting. February 21-23,2007. Shepherdstown, WV.

DNA Microarray Detection of Antimicrobial Resistance Genes in Bacteria Co-Cultured from Swine Feces - (Abstract Only)

Frye, J.G., Jackson, C.R., Englen, M.D., Meinersmann, R.J., Berrang, M.E., Bailey, J.S., Rondeau, G., Long, F., Porwollik, S., Mcclelland, M. 2007. Dna microarray detection of antimicrobial resistance genes in bacteria co-cultured from swine feces. American Society for Microbiology Conference. 167/A(A-076):17.

Genomic Variation of Salmonella enterica Serovar Paratyphi B (Tartrate +) Isolates from Clinical and Zoonotic Specimens as Measured by PFGE and Fragment Analysis of Multiplex PCR Products - (Abstract Only)

Leader, B.T., Frye, J.G., Kim, S., Russell, D., Jackson, C.R., Mcglinchey, B., Cray, P.J., Hu, J., Boyle, D. 2007. Genomic Variation of Salmonella enterica Serovar Paratyphi B (Tartrate +) Isolates from Clinical and Zoonotic Specimens as Measured by PFGE and Fragment Analysis of Multiplex PCR Products. American Society for Microbiology Conference. 282/C(C-287):198.

Rapid Detection of Antimicrobial Resistance Genes in Salmonella Serovars using DNA Microarray Technology - (Abstract Only)

Nayak, R., Wen, Z., Frye, J.G., Liu, J., Stormo, G. 2007. Rapid Detection of Antimicrobial Resistance Genes in Salmonella Serovars using DNA Microarray Technology [abstract]. American Society for Microbiology Conference. 304/Z(Z-082):745.

Detection of antimicrobial resistance genes by DNA microarray - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Bailey, J.S., Berrang, M.E., Meinersmann, R.J. 2006. Detection of antimicrobial resistance genes by DNA microarray [abstract]. Alliance for the Prudent Use of Antibiotics 1st World Congress. December 11-12, 2006. Boston, MA.

Persistence and transmission of Salmonella Infantis in a veterinary teaching hospital - (Proceedings)

Dunowska, M., Morley, P.S., Traub-Dargatz, J.L., Davis, M.A., Patterson, G., Frye, J.G., Hyatt, D.R., Dargatz, D.A. 2006. Persistence and transmission of Salmonella Infantis in a veterinary teaching hospital. Research Workers in Animal Diseases Conference Proceedings. 50:138.

Application of Microarray Technology to Investigate Salmonella and Antimicrobial Resistance - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. Application of Microarray Technology to Investigate Salmonella and Antimicrobial Resistance [abstract]. University of Georgia. October 23, 2006. Athens, Georgia.

Detection of antimicrobial resistance genes by DNA microarray - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. Detection of antimicrobial resistance genes by DNA microarray [abstract]. Kansas State University. October 5, 2006. Manhattan, KS.

Update: The National Antimicrobial Resistance Monitoring System Enteric Bacteria (NARMS): Animal Arm - (Proceedings)

Cray, P.J., Bailey, J.S., Frye, J.G., Jackson, C.R., Englen, M.D., Berrang, M.E., Meinersmann, R.J., Wineland, N.E., Dargatz, D.A., Anandarama, N. 2006. Update: The National Antimicrobial Resistance Monitoring System Enteric Bacteria (NARMS): Animal Arm. United States Animal Health Association Proceedings. October 12-18, 2006. Minneapolis, MN.

Overview Of Antimicrobial Resistance In Food Borne Pathogens In The United States - (Proceedings)

Cray, P.J., Bailey, J.S., Frye, J.G., Jackson, C.R., Englen, M.D., Plumblee, J., Haro, J.H., Anandarama, N. 2006. Overview Of Antimicrobial Resistance In Food Borne Pathogens In The United States. United States-Japan Cooperative Program in Natural Resources. October 21-28, 2006. Sonoma, CA. FS31-FS33.

Characterization and Tracking of Antimicrobial Resistant Pathogens at Various Points along the Poultry Production Chain - (Proceedings)

Cray, P.J., Bailey, J.S., Frye, J.G., Jackson, C.R., Englen, M.D., Plumblee, J., Haro, J.H., Anandarama, N. 2006. Characterization and Tracking of Antimicrobial Resistant Pathogens at Various Points along the Poultry Production Chain. Poultry Health and Processing National Meeting Proceedings.49-52.

COMPARISON OF SALMONELLA ENTERICA SEROTYPE INFANTIS ISOLATES FROM A VETERINARY TEACHING HOSPITAL - (Peer Reviewed Journal)

Dunowska, M., Morley, P.S., Traub-Dargatz, J.L., David, M.A., Patterson, G., Frye, J.G., Hyatt, D.R., Dargatz, D.A. 2007. Comparison of salmonella enterica serotype infantis isolates from a veterinary teaching hospital. Journal of Applied Microbiology. 102(6):1527-1536.

MULTIPLEX PCR BASED METHOD FOR IDENTIFICATION OF COMMON CLINICAL SEROTYPES OF SALMONELLA ENTERICA SUBSP. ENTERICA - (Peer Reviewed Journal)

Kim, S., Frye, J.G., Hu, J., Cray, P.J., Gautom, R., Boyle, D.S. 2006. Multiplex pcr based method for identification of common clinical serotypes of salmonella enterica subsp. enterica. Journal of Clinical Microbiology. 44(10)3608-3615.

ANTIMICROBIAL RESISTANCE TRENDS IN SALMONELLA - (Abstract Only)

Cray, P.J., Bailey, J.S., Frye, J.G., Haro, J.H., Plumblee, J., Cosby, D.E. 2006. Antimicrobial resistance trends in salmonella [abstract]. International Association for Food Protection. 93:17.

DEVELOPMENT OF A UNIVERSAL DNA MICROARRAY FOR DETECTING EXOGENOUS ANTIMICROBIAL RESISTANCE GENES IN DIVERSE BACTERIA - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2006. Development of a universal dna microarray for detecting exogenous antimicrobial resistance genes in diverse bacteria. Annual Conference of Antimicrobial Resistance. S8:43.

DETECTION OF EXOGENOUS ANTIMICROBIAL RESISTANCE GENES BY DNA MICROARRAY - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2006. Detection of exogenous antimicrobial resistance genes by dna microarray [abstract]. Symposium on DNA-based Serotyping and Subtyping of Enteric Bacteria. March 23, 2006. Atlanta, GA.

A MULTIPLEX PCR METHOD FOR THE RAPID SEROTYPING OF COMMON CLINICAL ISOLATES OF SALMONELLA ENTERICA SUBSPECIES ENTERICA - (Abstract Only)

Boyle, D.S., Kim, S., Frye, J.G., Gautom, R., Hu, J., Cray, P.J. 2006. A multiplex pcr method for the rapid serotyping of common clinical isolates of salmonella enterica subspecies enterica. Symposium on Molecular Serotyping and Subtyping of Enteric Bacteria. 03/23/2006. Atlanta, GA

TRANSMISSION OF SALMONELLA ENTERICA SEROTYPE TYPHIMURIUM IN POULTRY WITH AND WITHOUT ANTIMICROBIAL SELECTIVE PRESSURE - (Peer Reviewed Journal)

Garland, J.E., Frye, J.G., Gray, J.T., Berrang, M.E., Harrison, M.A., Cray, P.J. Transmission of salmonella enterica serotype typhimurium in poultry with and without antimicrobial selective pressure. Journal of Applied Microbiology. 101(6):1301-1308

CEPHALOSPORIN RESISTANCE AMONG BOVINE SALMONELLA ENTERICA SEROTYPES - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Rose, M. 2006. Cephalosporin resistance among bovine salmonella enterica serotypes [abstract]. Proceedings of the International Conference on Emerging Infectious Diseases. 114:85.

SALMONELLA ENTERICA SEROVAR TYPHIMURIUM REQUIRES THE LPF, PEF, AND TAFI FIMBRIAE FOR BIOFILM FORMATION ON HEP-2 TISSUE CULTURE CELLS AND CHICKEN INTESTINAL EPITHELIUM - (Peer Reviewed Journal)

Ledeboer, N.A., Frye, J.G., Mcclelland, M., Jones, B.D. 2006. Salmonella enterica serovar typhimurium requires the lpf, pef, and tafi fimbriae for biofilm formation on hep-2 tissue culture cells and chicken intestinal epithelium. Infection and Immunity. 74(6):3156-3169.

DETECTION OF ANTIMICROBIAL RESISTANCE GENES BY DNA MICROARRAY - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D. 2006. Detection of antimicrobial resistance genes by dna microarray [abstract]. Washington State Department of Health. February 15, 2006. Seattle, WA.

GENOMIC METHODS FOR TYPING SALMONELLA ENTERICA CLONES - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Englen, M.D., Jesse, T.W. 2005. Genomic methods for typing salmonella enterica clones. U.S. Poultry Food Safety Conference. .

EVIDENCE OF A CONJUGAL ERYTHROMYCIN RESISTANCE ELEMENT IN THE LYME DISEASE SPIROCHETE, BORRELIA BURGDORFERI - (Peer Reviewed Journal)

Jackson, C.R., Frye, J.G., Boylan, J., Gherardini, F.C. 2006. Evidence of a conjugal erythromycin resistance element in the lyme disease spirochete, borrelia burgdorferi. International Journal of Antimicrobial Agents. 27(5):367-377.

IDENTIFICATION OF NEW FLAGELLAR GENES OF SALMONELLA ENTERICA SEROVAR TYPHIMURIUM - (Peer Reviewed Journal)

Frye,J.G., Karlinsey, J.E.,Felise, H.R., Marzolf,B., Dowidar,N., Mcclelland,M., Hughes,K.T. 2006. Identification of new flagellar genes of salmonella enterica serovar typhimurium. Journal of Bacteriology. 188(6):2233-2243.

ARS' FRYE ON DEVELOPING AN ARRAY TO DETECT ANTIMICROBIAL RESISTANCE GENES - (Abstract Only)

Frye, J.G., Jackson, C.R., Englen, M.D., Cray, P.J. 2005. Ars' frye on developing an array to detect antimicrobial resistance genes. BioArray News. November 16, 2005. 5(44):8-10.

DNA CHIPS SPOT AND HELP TRACK ANTIBIOTIC RESISTANCE - (Abstract Only)

Frye, J.G., Jackson, C.R., Englen, M.D., Cray, P.J. 2005. Dna chips spot and help track antibiotic resistance. Agricultural Research Service Publication. Nov; 53 (11): 17.

DNA MICROARRAY DETECTION OF ANTIMICROBIAL RESISTANCE GENES IN DIVERSE BACTERIA - (Peer Reviewed Journal)

Frye, J.G., Jesse, T.W., Long, F., Rondeau, G., Porwollik, S., McClelland, M., Jackson, C.R., Englen, M.D., Cray, P.J. 2006. DNA microarray detection of antimicrobial resistance genes in diverse bacteria. International Journal of Antimicrobial Agents. 27(2):138-151.

BACTERIAL EPIDEMIOLOGY AND ANTIMICROBIAL RESISTANCE RESEARCH UNIT PROJECTS - (Abstract Only)

Frye, J.G., Jackson, C.R., Englen, M.D., Bailey, J.S., Meinersmann, R.J., Berrang, M.E., Cray, P.J. 2005. Bacterial epidemiology and antimicrobial resistance research unit projects. Advances in Pre-harvest Reduction of Salmonella and Poultry. August 25, 2005. Athens, GA.

NARMS, VETNET AND CAHFSE - (Abstract Only)

Jackson, C.R., Frye, J.G., Englen, M.D., Bailey, J.S., Meinersmann, R.J., Berrang, M.E., Cray, P.J. 2005. Narms, vetnet and cahfse. Advances in Pre-harvest Reduction of Salmonella and Poultry. August 25 - 26, 2005. Athens, GA.

BIOFILM FORMATION BY SALMONELLA ENTERICA SEROVAR TYPHIMURIUM ON HEP-2 CELLS AND CHICKEN INTESTINAL EPITHELIUM IS DEPENDENT ON AT LEAST FIVE FIMBRIAL GENE CLUSTERS - (Abstract Only)

Ledeboer, N.A., Frye, J.G., Mcclelland, M., Jones, B.D. 2006. Biofilm formation by salmonella enterica serovar typhimurium on hep-2 cells and chicken intestinal epithelium is dependent on at least five fimbrial gene clusters. American Society for Microbiology Meeting. May 21-25, 2006. Orlando, FL.

CORRELATION OF PHENOTYPE WITH THE GENOTYPE OF EGG-CONTAMINATING SALMONELLA ENTERITIDIS - (Abstract Only)

Morales, C., Porwollik, S., Frye, J.G., Kinde, H., Mcclelland, M., Bouldin, J.G. 2005. Correlation of phenotype with the genotype of egg-contaminating salmonella enteritidis 2005 [CD ROM]. Version B-077, Washington, D.C., ASM. American Society for Microbiology.

Correlation of phenotype with the genotype of egg-contaminating salmonella enterica serovar enteritidis - (Peer Reviewed Journal)

Morales, C., Porowollik, S., Frye, J.G., Kinde, H., Mcclelland, M., Guard, J.Y. 2005. Correlation of phenotype with the genotype of egg-contaminating salmonella enterica serovar enteritidis. Applied and Environmental Microbiology. 71(8):4388-4399.

ALTERNATIVE SIGMA FACTOR INTERACTIONS IN SALMONELLA: SIGMA E AND SIGMA H PROMOTE ANTIOXIDANT DEFENCES BY ENHANCING SIGMA S LEVELS - (Peer Reviewed Journal)

Bang, L., Frye, J.G., Mcclelland, M., Velayudhan, J., Fang, F.C. 2005. Alternative sigma factor interactions in salmonella: sigma e and sigma h promote antioxidant defences by enhancing sigma s levels. Molecular Microbiology. 56(3):811-823.

CO-REGULATION OF SALMONELLA ENTERICA GENES REQUIRED FOR VIRULENCE AND RESISTANCE TO ANTIMICROBIAL PEPTIDES BY SLYA AND PHOP/PHOQ - (Peer Reviewed Journal)

Navarre, W.W., Halsey, T.A., Walthers, D., Frye, J.G., Mcclellend, M., Potter, J.L., Kenney, L., Gunn, J.S., Fang, F.C., Libby, S.J. 2005. Co-regulation of salmonella enterica genes required for virulence and resistance to antimicrobial peptides by slya and phop/phoq. Molecular Microbiology. 56(2):492-508.

HOST GENE EXPRESSION CHANGES AND DNA AMPLIFICATION DURING TEMPERATE PHAGE INDUCTION - (Peer Reviewed Journal)

Frye, J.G., Porwollik, S., Blackmer, F., Cheng, P., Mcclelland, M. 2005. Host gene expression changes and dna amplification during temperate phage induction. Journal of Bacteriology. 187(4):1485-1492.

DETECTION OF PHAGE ACTIVITY AND RESULTING ESCAPE REPLICATION IN SALMONELLA BY MICROARRAY - (Abstract Only)

Porwollik, S., Frye, J.G., Cheng, P., Blackmer, F., Mcclelland, M. 2004. Detection of phage activity and resulting escape replication in salmonella by microarray. International Conference on Microbial Genomes.

GENOMIC DIFFERENCES BETWEEN PT4 AND PT13A SALMONELLA ENTERITIDIS - (Proceedings)

Porwollik, S., Frye, J.G., Mcclelland, M., Bouldin, J.G. 2004. Genomic differences between pt4 and pt13a salmonella enteritidis. United States Animal Health Association Proceedings. p. 510-511

EXOPOLYSACCHARIDE PRODUCTION BY SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BIOFILMS GROWN ON EUKARYOTIC CELL SURFACES - (Abstract Only)

Ledeboer, N.A., Frye, J.G., Mcclelland, M., Jones, B.D. 2004. Exopolysaccharide production by salmonella enterica serovar typhimurium biofilms grown on eukaryotic cell surfaces. American Society for Microbiology Meeting. B-120.

IDENTIFICATION OF SALMONELLA GENES THAT ARE EXPRESSED IN RESPONSE TO THE PRESENCE OF OTHER BACTERIAL SPECIES - (Abstract Only)

Dyszel, J.L., Carter, H.D., Frye, J.G., Mcclelland, M., Ahmer, B.M. 2004. Identification of salmonella genes that are expressed in response to the presence of other bacterial species. American Society for Microbiology Meeting. N-294.

APPARENT REGULATION OF SLYA SPECIFICITY BY PHOP IN SALMONELLA ENTERICA - (Abstract Only)

Navarre, W.W., Halsey, T.A., Walthers, D., Frye, J.G., Mcclelland, M., Potter, J.L., Kenney, L., Gunn, J., Fang, F.C., Libby, S.J. 2004. Apparent regulation of slya specificity by phop in salmonella enterica. American Society for Microbiology Meeting. B-215.

APPLICATION OF MICROARRAY TECHNOLOGY TO INVESTIGATE SALMONELLA - (Abstract Only)

Frye, J.G., Cray, P.J. Application of microarray technology to investigate salmonella. Association Official Analytical Chemists Annual Intrl Meeting & Exposition. 2004.

EXTENDED SPECTRUM BETA-LACTAM RESISTANCE SALMONELLA ANIMAL ISOLATES - (Abstract Only)

Frye, J.G., Cray, P.J., Jackson, C.R., Tankson, J.D. 2004. Extended spectrum beta-lactam resistance salmonella animal isolates. National Antimicrobial Resistance Monitoring System Scientific Meeting. March 4 - 5, 2004. Atlanta, GA.

GENE EXPRESSION PATTERNS DURING SWARMING IN SALMONELLA TYPHIMURIUM: GENES SPECIFIC TO SURFACE GROWTH AND PUTATIVE NEW MOTILITY AND PATHOGENICITY GENES - (Peer Reviewed Journal)

Qingfeng, W., Frye, J.G., Mcclelland, M., Harshey, R.M. 2004. Gene expression patterns during swarming in salmonella typhimurium: genes specific to surface growth and putative new motility and pathogenicity genes. Molecular Microbiology. 52(1):169-187.