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United States Department of Agriculture

Agricultural Research Service

Related Topics

Bryan M Swingle
Plant-Microbe Interactions Research
Research Molecular Biologist

Phone: (607) 255-7894
Fax: (607) 255-4471
Room 302
USDA-ARS, ROBERT W. HOLLEY CENTER
TOWER RD.
ITHACA, NY, 14853-2901

Projects
PSEUDOMONAS SYSTEMS BIOLOGY
Appropriated (D)
  Accession Number: 423000

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Global analysis of the HrpL regulon in the plant pathogen Pseudomonas syringae pv. tomato DC3000 reveals new regulon members with diverse functions - (Peer Reviewed Journal)
Lam, H.N., Chakravarthy, S., Wei, H., Buinguyen, H., Stodghill, P., Swingle, B.M., Collmer, A., Cartinhour, S.W. 2014. Global analysis of the HrpL regulon in the plant pathogen Pseudomonas syringae pv. tomato DC3000 reveals new regulon members with diverse functions. PLoS Pathogens. 9(8):e106115. DOI: 10.1371/journal.pone.0106115.
Genomic plasticity enables phenotypic variation of Pseudomonas syringae pv. tomato DC3000 - (Peer Reviewed Journal)
Swingle, B.M., Bao, Z., Stodghill, P., Myers, C.R., Lam, H., Markel, E.J., Collmer, A., Cartinhour, S.W., Schweitzer, P. 2014. Genomic plasticity enables phenotypic variation of Pseudomonas syringae pv. tomato DC3000. Molecular Microbiology. 9(2):e86628. DOI: 10.1371/Journal.pone.0086628.
RecTEPsy mediated recombineering in Pseudomonas syringae - (Other)
Swingle, B.M. 2014. RecTEPsy mediated recombineering in Pseudomonas syringae. Methods in Molecular Biology. 1114:3-10. DOI: 10.1007/978-1-62703-761-7_1.
Oligonucleotide recombination enabled site-specific mutagenesis in bacteria - (Other)
Swingle, B.M. 2013. Oligonucleotide recombination enabled site-specific mutagenesis in bacteria. Methods in Molecular Biology. 978:127-132.
Pseudomonas syringae pv. tomato DC3000 CmaL (PSPTO4723), a DUF1330 family member, is needed to produce L-allo-isoleucine, a precursor for the phytotoxin coronatine - (Peer Reviewed Journal)
Worley, J.N., Russell, A.B., Wexler, A.G., Bronstein, P., Kvitko, B.H., Krasnoff, S., Munkvold, K.R., Swingle, B.M., Gibson, D.M., Collmer, A. 2013. Pseudomonas syringae pv. tomato DC3000 CmaL (PSPTO4723), a DUF1330 family member, is needed to produce L-allo-isoleucine, a precursor for the phytotoxin coronatine. Journal of Bacteriology. 195(2):287-296.
Regulons of the Pseudomonas syringae pv. tomato DC3000 iron starvation sigma factors PSPTO_0444, PSPTO_1209 and PSPTO_1286 - (Peer Reviewed Journal)
Swingle, B.M., Markel, E.J., Butcher, B.G., Myers, C.R., Stodghill, P., Cartinhour, S.W. 2013. Regulons of the Pseudomonas syringae pv. tomato DC3000 iron starvation sigma factors PSPTO_0444, PSPTO_1209 and PSPTO_1286. Applied and Environmental Microbiology. 79(2):725-727.
Substrate and target sequence lengths influence RecTEPsy recombineering efficiency in Pseudomonas syringae - (Peer Reviewed Journal)
Swingle, B.M., Bao, Z., Cartinhour, S.W. 2012. Substrate and target sequence lengths influence RecTEPsy recombineering efficiency in Pseudomonas syringae. PLoS One. 7(11):e50617. DOI: 10.1371/journal.pone.0050617.
An ECF sigma factor mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores - (Peer Reviewed Journal)
Swingle, B.M., Markel, E.J., Maciak, C.L., Butcher, B., Myers, C., Stodghill, P., Cartinhour, S.W., Bao, Z. 2011. An ECF sigma factor mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores. Journal of Bacteriology. 193:5775-5783.
New strategies for genetic engineering Pseudomonas syringae using recombination - (Abstract Only)
Swingle, B.M. 2011. New strategies for genetic engineering Pseudomonas syringae using recombination. Molecular Genetics of Bacteria and Phage. p. 20.
Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000 - (Peer Reviewed Journal)
Butcher, B.G., Bronstein, P., Myers, C., Stodghill, P., Bolton, J.J., Markel, E.J., Filiatrault, M.J., Swingle, B.M., Gaballa, A., Helmann, J.D., Schneider, D.J., Cartinhour, S.W. 2011. Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000. Journal of Bacteriology. 193(18):4598-4611. Available: http://www.ncbi.nlm.nih.gov/pubmed/21784947.
Bacterial effector HopF2 interacts with AvrPto and suppresses Arabidopsis innate immunity at the plasma membrane - (Peer Reviewed Journal)
Wu, S., Lu, D., Kabbage, M., Wei, H., Swingle, B.M., Dickman, M., He, P., Shan, L. 2011. Bacterial effector HopF2 interacts with AvrPto and suppresses Arabidopsis innate immunity at the plasma membrane. Molecular Plant-Microbe Interactions. 24(5):585-593.
Recombineering Pseudomonas syringae - (Abstract Only)
Swingle, B.M. 2010. Recombineering Pseudomonas syringae [abstract]. The 8th International Conference on Pseudomonas Syringae and Related Pathogens. 8/31.
Global survey of Fur binding refines the iron responsive regulon of Pseudomonas syringae - (Abstract Only)
Bronstein, P., Butcher, B.G., Myers, C.R., Stodghill, P., Swingle, B.M., Cartinhour, S.W. 2010. Global survey of Fur binding refines the iron responsive regulon of Pseudomonas syringae [abstract]. p. 31.
Functional analysis of PSPTO_1203 a FecI-like ECF Sigma Factor of Pseudomonas syringae pv. tomato DC3000 - (Abstract Only)
Swingle, B.M. 2010. Functional analysis of PSPTO_1203 a FecI-like ECF Sigma Factor of Pseudomonas syringae pv. tomato DC3000. Gordon Research Conference Proceedings. 99/12.
Recombineering using RecET from Pseudomonas syringae - (Abstract Only)
Swingle, B.M., Bao, Z., Markel, E.J., Cartinhour, S.W. 2010. Recombineering using RecET from Pseudomonas syringae. Molecular Genetics of Bacteria and Phage. 61/34.
Oligonucleotide recombination: a hidden treasure - (Peer Reviewed Journal)
Swingle, B.M., Markel, E.J., Cartinhour, S.W. 2010. Oligonucleotide recombination: a hidden treasure. Bioengineered Bugs. 1(4):1-4.
A new shuttle vector for gene expression in biopolymer-producing Ralstonia eutropha - (Peer Reviewed Journal)
Solaiman, D., Swingle, B.M., Ashby, R.D. 2010. A new shuttle vector for gene expression in biopolymer-producing Ralstonia eutropha. Journal of Microbiological Methods. 82:120-123.
Isolation of novel Pseudomonas syringae promoters and functional characterization in polyhydroxyalkanoate-producing pseudomads - (Peer Reviewed Journal)
Solaiman, D., Swingle, B.M. 2010. Isolation of novel Pseudomonas syringae promoters and functional characterization in polyhydroxyalkanoate-producing pseudomads. New Biotechnology. 27(1):1-9.
Oligonucleotide recombination in gram negative bacteria - (Peer Reviewed Journal)
Swingle, B.M., Markel, E.J., Costantino, N., Bubunenko, M., Cartinhour, S.W., Court, D. 2010. Oligonucleotide recombination in gram negative bacteria. Molecular Microbiology. 75(1):138-148.
Oligonucleotide recombination in bacteria - (Abstract Only)
Swingle, B.M., Costantino, N., Court, D., Bubunenko, M.G., Cartinhour, S.W. 2009. Oligonucleotide recombination in bacteria. [abstract}. 17:28.
Oligo Recombination in Gram Negative Bacteria - (Abstract Only)
Swingle, B.M., Cartinhour, S.W., Court, D. 2009. Oligo Recombination in Gram Negative Bacteria. Molecular Genetics of Bacteria and Phage. p. 166.
Ecf Sigma Factor Regulation in Pseudomonas Syringae - (Abstract Only)
Swingle, B.M. 2008. Ecf sigma factor regulation in pseudomonas syringae. Molecular Genetics of Bacteria and Phage. p. 139.
Characterization of Promoter Motifs Regulated by ECF Sigma Factors of Pseudomonas syringae - (Abstract Only)
Swingle, B.M. 2008. Characterization of Promoter Motifs Regulated by ECF Sigma Factors of Pseudomonas syringae. Gordon Research Conference Proceedings. 4-2:p.14.
Characterization of the Promoter Motif Regulated by PSPTO_1209 a FecI-like ECF Sigma Factor of Pseudomonas syringae pv. tomato DC3000 - (Abstract Only)
Swingle, B.M., Schneider, D.J. 2008. Characterization of the Promoter Motif Regulated by PSPTO_1209 a FecI-like ECF Sigma Factor of Pseudomonas syringae pv. tomato DC3000. American Society for Microbiology. H-039:p.128.
Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads - (Peer Reviewed Journal)
Swingle, B.M., Thete, D., Moll, M., Myers, C., Schneider, D.J., Cartinhour, S.W. 2008. Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads. Molecular Microbiology. 68(4):871-889.
Extracytoplasmic Function (ECF) Sigma Factor Gene Regulation in Pseudomonas syringae: Integrated Molecular and Computational Characterization of PvdS-Regulated Promoters - (Abstract Only)
Swingle, B.M., Thete,, D., Moll, M., Myers,, C., Schneider, D.J., Cartinhour, S.W. 2007. Extracytoplasmic Function (ECF) Sigma Factor Gene Regulation in Pseudomonas syringae: Integrated Molecular and Computational Characterization of PvdS-Regulated Promoters. Molecular Genetics of Bacteria and Phage. p. 262.
Pyoverdine and beyond: PvdS dependent gene regulation in Pseudomonas syringae - (Abstract Only)
Swingle, B.M., Thete,, D., Moll, M., Myers,, C., Schneider, D.J., Cartinhour, S.W. Pyoverdine and beyond: PvdS dependent gene regulation in Pseudomonas syringae. American Society for Microbiology Conference. 159A:p. 90.
Last Modified: 12/19/2014
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