Liu, Y., Ceruso, M., Pepe, T., Cortesi, M., Gunther, N.W., Fratamico, P.M. 2012. Construction of Listeria monocytogenes mutants with in-frame deletions in putative ATP-binding cassette (ABC) transporters and analysis of their growth under stress conditions. Journal of Microbial and Biochemical Technology. 4(7):141-146.
Fratamico, P.M., Bagi, L.K. 2012. Detection of non-O157 STEC in ground beef using the GeneDisc real-time PCR system. Frontiers in Cellular and Infection Microbiology. DOI: 10.3389/fcimb.2012.00152.
Mukhopadhyay, S., Ukuku, D.O., Fratamico, P.M. 2012. The effects of integrated treatment of UV light and low dose gamma radiation on Escherichia coli O157:H7 and Salmonella enterica on grape tomatoes [abstract]. International Association for Food Protection, July 22-25, 2012, Providence, Rhode Island. 1:1.
Feng, P., Strockbine, N., Fratamico, P.M. 2012. Methods of detection and characterization of pathogenic Escherichia coli. In: Eds.UNESCO-EOLSS Joint Committee. Encyclopedia of Life Support Systems. Oxford,UK: Eolss Publishers. Available: http://www.eolss.net.
Medina, M.B., Shelver, W.L., Fratamico, P.M., Fortis, L., Narang, N., Cray, Jr., W., Esteban, E., Tillman, G., Debroy, C. 2012. Latex agglutination assays for detection and of non-O157 Shiga toxin-producing E. coli serogroups O26, O45, O103, O111, O121 and O145. Journal of Food Protection. 75(5):819-826.
Fratamico, P.M., Juneja, V.K., Annous, B.A., Rasanayagam, V., Sundar, M., Braithwaite, D., Fisher, S. 2012. Application of ozonated dry ice (AligalTM Blue Ice) for packaging and transport in the food industry. Journal of Food Science. 77(5):M285-M291.
Debroy, C., Roberts, E., Fratamico, P.M. 2012. Detection of O antigens in Escherichia coli. Animal Health Research Reviews. Cambridge University Press. England. 12(2):169-185.
Kich, J.D., Coldebella, A., Mores, N., Nogueira, M.G., Cardoso, M., Fratamico, P.M., Call, J.E., Cray, P.J., Luchansky, J.B. 2011. Prevalence, distribution, and molecular characterization of Salmonella recovered from swine finishing herds and a slaughter facility in Santa Catarina, Brazil. International Journal of Food Microbiology. 151(3):307-313.
Gunther, N.W., He, Y., Fratamico, P.M. 2011. Effects of polyphosphate additives on the pH of processed chicken exudates and the survival of Campylobacter. Journal of Food Protection. 74:1735-1740.
Yan, X., Gurtler, J., Fratamico, P.M., Hu, J., Gunther, N.W., Juneja, V.K., Huang, L. 2011. Comprehensive approaches for molecular biomarker discovery for the detection and identification of Cronobacter spp. (Enterobacter sakazakii), Salmonella, and other foodborne pathogens. Applied and Environmental Microbiology. 77:1833-1843.
Smith, J.L., Fratamico, P.M., Yan, X. 2011. Eavesdropping by bacteria: the role of SdiA in Escherichia coli and Salmonella enterica serovar Typhimurium quorum sensing. Foodborne Pathogens and Disease. 8:169-178.
Fratamico, P.M., Yan, X., Caprioli, A., Esposito, G., Needleman, D.S., Pepe, T., Tozzoli, R., Cortesi, M.L., Morabito, S. 2011. The complete DNA sequence and analysis of the virulence plasmid and of five additional plasmids carried by Shiga toxin-producing Escherichia coli O26:H11 strain H30. Journal of Medical Microbiology. 301:192-203.
Kamisaki-Horikoshi, M., Okada, Y., Takeshita, K., Sameshima, T., Kawasaki, S., Kawamoto, S., Fratamico, P.M. 2011. Evaluation of TA10 Broth for Recovery of Heat- and Freeze-Injured Salmonella from Beef. Official Methods of Analysis of AOAC International. 94:857-862.
Kawasaki, S., Fratamico, P.M., Horikoshi, N., Okada, Y., Takeshita, K., Sameshima, T., Kawamoto, S. 2011. Development of a multiplex PCR detection kit for Salmonella spp., Listeria monocytogenes, and Escherichia coli O157:H7. Japan Agricultural Research Quarterly. 45:77-81.
Yan, X., Peng, Y., Meng, J., Rusante, J., Fratamico, P.M., Huang, L., Juneja, V.K., Needleman, D.S. 2011. From ontology selection and semantic web to the integrated information system of food-borne diseases and food safety. Software Tools and Algorithms for Biological Systems. 26-34.
Fratamico, P.M., Debroy, C. 2010. Detection of Escherichia coli O157H7 in food using real-time multiplex PCR assays targeting the stx1, stx2, wzyo157, and the fliCh7 or eae genes. Journal of Food Analytical Methods. 3:330-337.
Fratamico, P.M., Debroy, C. 2010. Detection of E. coli O157:H7 in Food Using Real-Time Multiplex PCR Assays Targeting the stx1, stx2, wzy, and the fliCh7 or eae Genes. Journal of Food Analytical Methods. 3:330-337.
Fratamico, P.M., Yan, X., Debroy, C., Bryne, B., Monaghan, A., Liu, Y., Bolton, D., Fanning, S. 2010. Escherichia coli serogroup O2 and O28ac O-antigen gene cluster sequences and detection of pathogenic E. coli O2 and O28ac by PCR. Canadian Journal of Microbiology. 56:308-316.
Kawasaki, S., Fratamico, P.M., Horikoshi, N., Okada, Y., Takeshita, K., Sameshima, T., Kawamoto, S. 2010. Multiplex real-time PCR assay for the specific detection and quantification of Salmonella spp., Listeria monocytogenes, and Escherichia coli O157:H7 in ground pork samples. Foodborne Pathogens and Disease. 7(5):549-554.
Yan, X., Peng, Y., Meng, J., Ruzante, J., Fratamico, P.M., Huang, L., Juneja, V.K. 2009. Microbial profiling, neural network and semantic web: an integrated information system for human pathogen risk management, prevention and surveillance in food safety. International Conference on Predictive Modeling in Foods. 1:11-12.
Annous, B.A., Smith, J.L., Fratamico, P.M., and Solomon, E.B. 2009. Biofilms in fresh fruit and vegetables. In: Fratamico, P.M., Annous, B.A., Gunther N.W. IV, editors. Biofilms in the food and beverage industries. 1st edition. Boca Raton, FL: Woodhead Publishing Limited and CRC Press LLC. p. 517-535.
Narang, N., Fratamico, P.M., Tilman, G., Pupedis, K., Cray Jr, W.C. 2009. Comparison of the H7 latex agglutination test with a fliCh7 real-time PCR assay for confirmation of the H type of Escherichia coli O157:H7. Journal of Food Protection. 72(10):2195-2197.
Yan, X., Gui, J., Fratamico, P.M. 2009. MicroBQs: a centralized database for use in studying bacterial biofilms and quorum sensing. Book Chapter. Oxford, UK: Woodhead Publishing Ltd. p. 152-166. Biofilms in the Food and Beverage Industries, P.M. Fratamico, B.A. Annous, and N.W. Gunther (Ed.)
Pepe, T., Dominicis, R., Esposito, G., Demarco, I., Fratamico, P.M., Cortesi, M.L. 2009. DETECTION OF CAMPYLOBACTER FROM POULTRY CARCASSES AT SLAUGHTER AND DIFFERENTIATION OF CAMPYLOBACTER JEJUNI AND CAMPYLOBACTER COLI BY MULTIPLEX PCR. Journal of Food Protection. 72(8):1718-1721.
Smith, J.L., Fratamico, P.M., Uhlich, G.A. 2009. Molecular mechanisms involved in biofilm formation by food-associated bacteria. Book Chapter. In: Fratamico, P.M., Annous, B.A., Gunther, N.W., editors. Biofilms in the Food and Beverage Industries. Oxford, UK: Woodhead Publishing, Ltd. p. 42-98.
Fratamico, P.M., Debroy, C., Miyamoto, T., Liu, Y. 2009. PCR Detection of Enterohemorrhagic Escherichia coli O145 in Food by Targeting Genes in the E. coli O145 O-Antigen Gene Cluster and the Shiga Toxin 1 and Shiga Toxin 2 Genes. Foodborne Pathogens and Disease. 6(5):605-611.
Gallegos-Robles, M., Morales-Loredo, A., Alvarez-Ojeda, G., Osuna-Garcia, J., Martinez, I.O., Ramos-Morales, L.H., Fratamico, P.M. 2009. Pcr detection and microbiological isolation of Salmonella spp. from bovine meat and cantaloupe. Journal of Food Science and Technology. 74(Nrl):M37-M40.
Annous, B.A., Fratamico, P.M., Smith, J.L. 2009. Quorum Sensing in Biofilms: Why Bacteria Behave the Way They Do. Journal of Food Science. 74(1):R24-R37.
Kawasaski, S., Fratamico, P.M., Horikoshi, N., Okada, Y., Takeshita, K., Sameshima, T., Kawamoto, S. 2009. Evaluation of a multiplex PCR system for simultaneous detection of Salmonella spp., Listeria monocytogenes, and Escherichia coli O157:H7 in foods and in food subjected to freezing. Foodborne Pathogens & Disease. 6(1):81-89.
Fratamico, P.M., Liu, Y., Debroy, C. 2009. Sequencing of the Escherichia coli O22 O Antigen Gene Cluster and Detection of E. coli Serogroups O22 and O91 by Multiplex PCR Assays Targeting Virulence Genes and the wzy Gene in the Respective O-Antigen Gene Clusters. Journal of Food Analytical Methods. 2:169-179.
Gallegos-Robles, M., Loredo, A., Ojeda, G., Vega, A., Chew, Y., Velarde, S., Fratamico, P.M. 2008. Identification of Salmonella Serotypes Isolated from Cantaloupe and Chile Pepper Production Systems in Mexico by PCR-Restriction Fragment Length Polymorphism. Journal of Food Protection. 71(11):2217-2222.
Smith, J.L., Fratamico, P.M. 2009. Diseases with Long Term Consequences in Search of a Microbial Agent. In: Sequelae and Long-Term Consequences of Infectious Diseases. P.M. Fratamico, J.L. Smith, and Ka.A. Brogden (Ed.) Washington, D.C.: ASM Press. p. 459-475.
Liu, Y., Fratamico, P.M., Debroy, C., Bumbaugh, A., Allen, J. 2008. DNA SEQUENCING, ANALYSIS, AND IDENTIFICATION OF SEROGROUP-SPECIFIC GENES IN THE ESCHERICHIA COLI O28AC AND O118 O ANTIGEN GENE CLUSTERS. Foodborne Pathogens and Disease. 5(4):449-457.
Orozco, L., Iturriaga, M., Tamplin, M., Fratamico, P.M., Call, J.E., Luchansky, J.B., Escartin, E. 2008. Animal and Environmental Impact on the Presence and Distribution of Salmonella spp. in Hydroponic Tomato Greenhouses. Journal of Food Protection. 71(4):676-683.
Fratamico, P.M., Kawasaki, S. 2007. Applications of the polymerase chain reaction (pcr) for detection, identification, and typing of food-borne microorganisms. CRC Press, New York. Microbial Food Contamination, C.Wilson 9ed.) 2nd edition. p.213-254
Liu, Y., Debroy, C., Fratamico, P.M. 2007. Molecular Characterization of the Escherichia coli Serogroup O117, O126, and O146 O Antigen Gene Clusters and Development of PCR Assays Targeting Serogroup O117-, O126-, and O146-Specific DNA Sequences. Molecular and Cellular Probes. 21:295-302.
Fratamico, P.M., Bagi, L.K. 2007. Comparison of methods for detection and isolation of cold-and freeze-stressed escherichia coli o157:h7 in raw ground beef. Journal of Food Protection. Vol.70(7):1663-1669.
Feder, I.E., Gray, J.T., Pearce, R., Fratamico, P.M., Bush, E., Porto, A., Wallace, F.M., Cray, P.J., Luchansky, J.B. 2007. Testing of swine feces obtained through the national animal health monitoring system's swine 2000 study for the presence of escherichia coli 0157:h7. Journal of Food Protection. Vol. 70(6):1489-1492.
Fratamico, P.M., Luchansky, J.B. 2007. Applications of omics for food safety and security. Meeting Abstract. International Association for Food Protection. S19.
Fratamico, P.M., Debroy, C. 2007. Detection of Escherichia coli O157:H7 in food using a real-time multiplex PCR assay. Abstract. Internatinal Association for Food Protection. P3-69.
Orozco, L.R., Tamplin, M.L., Fratamico, P.M., Call, J.E., Luchansky, J.B., Escartin, E. 2006. Potential sources of salmonella contamination on tomatoes grown in hydroponic greenhouses. [Abstract] International Association for Food Protection's Annual Meeting P4-11. pg. 158.
Liu, Y., Fratamico, P.M. 2006. Escherichia coli o antigen typing using dna microarrays. {Abstract}. International Association of Food Protection. P3-54.
Kich, J., Coldebella, A., Mores, N., Fratamico, P.M., Call, J.E., Luchansky, J.B., Cray, P.J. 2006. Prevalence and antibiotic resistance of salmonella isolates recovered from finishing pig herds and slaughter facilities in southern brazil. {Abstract}. International Association of Food Protection. P2-10. p. 117.
Fratamico, P.M., Debroy, C., Miyamoto, T., Liu, Y. 2005. Detection of Enterohemorrhagic Escherichia Coli 0145 by PCR Targeting Genes in the E. Coli 0145 Antigen Gene Cluster and the Shiga Toxin 1 and Shiga Toxin 2 Genes. Association of Official Analytical Chemists. Abstract. Paper # P-611.
Fratamico, P.M., Debroy, C., Strobaugh Jr, T.P., Chen, C. 2005. Dna sequence of the escherichia coli o103 o antigen gene cluster and detection of enterohemorragic e. coli o103 by pcr amplification of the wzx and wzy genes. Canadian Journal of Microbiology.
Debroy, C., Fratamico, P.M., Briggs, C.E., Kundrat, J., Roberts, E., Liu, Y., Davis, M. 2005. Pcr assays for detection and identification of Escherichia coli serogroups O45 and O55 targeting the wzx and wzy genes in the O antigen gene clusters. Applied and Environmental Microbiology. v. 71. p. 4919-4924.
Fratamico, P.M., Gehring, A.G., Karns, J.S., Van Kessel, J.S. 2005. Detecting pathogens in cattle and meat. Book Chapter. Improving the Safety of Fresh Meat, Woodhead Publishing Ltd., Cambridge, UK pg:25-55
Fratamico, P.M., Bagi, L.K., Liu, Y., Miyamoto, T. 2004. Nucleic acid-based methods for detection and analysis of foodborne pathogens. United States Japan Natural Resources Protein Panel. p. 348-353.
Fratamico, P.M., Bagi, L.K., Bush, E.J., Solow, B.T. 2004. Prevalence and characterization of shiga toxin-producing Escherichia coli in swine feces recovered in the national animal health monitoring system's swine 2000 study. Applied and Environmental Microbiology. v.70. P. 12.
Fratamico, P.M. 2004. Nucleic acid-based methods for detection and characterization of food-borne pathogens. River Falls Food Microbiology Symposium. Abstract. Paper # 14.
Fratamico, P.M., Smith, J.L. 2005. Escherichia coli. In Foodborne Infections and Intoxications. D.O. Cliver and H. Reimann (ed.), Academic Press, New York.p. 205-258.
Debroy, C., Roberts, E., Kundrat, J., Davis, M.A., Briggs, C.E., Fratamico, P.M. 2004. Detection of escherichia coli serotypes 026 and 0113 by pcr amplification of the wzx and wzy genes. Applied and Environmental Microbiology. 2004. v. 70(3):1830-1832.
Novak, J.S., Fratamico, P.M. 2004. An evaluation of ascorbic acid as a quorum sensing analogue to control growth, sporulation, and enterotoxin production in clostridium perfringens. Applied And Environmental Microbiology. Vol. 69. Nr. 3. 2004. p.72-78.
Fratamico, P.M., Bagi, L.K., Briggs, C.E., Debroy, C. 2003. Detection and characterization of pathogenic escherichia coli. United States Japan Natural Resources Protein Panel. p. 92-98.
FRATAMICO, P.M., BRIGGS, C.E., NEEDLE, D., CHEN, C., DEBROY, C. Sequence of the Escherichia coli O121 O antigen gene cluster and detection of E. coli O121 by PCR amplification of the wzx and wzy genes. JOURNAL OF CLINICAL MICROBIOLOGY. Vol. 41. No. 7. pg. 3379-3383.
FRATAMICO, P.M., BAGI, L.K. COMPARISON OF METHODS FOR DETECTION AND ISOLATION OF COLD-STRESSED ESCHERICHIA COLI O157:H7 IN RAW GROUND BEEF. MEETING ABSTRACT. 2003.
FRATAMICO, P.M., BAGI, L.K., BUSH, E. PREVALENCE AND CHARACTERIZATION OF SHIGA TOXIN-PRODUCING ESCHERICHIA COLI IN SWINE FECES BASED ON THE NATIONAL ANIMAL HEALTH MONITORING SYSTEM'S SWINE 2000 STUDY. MEETING ABSTRACT. 2003.
SOLOW, B.T., CLOAK, O.M., FRATAMICO, P.M. EFFECT OF TEMPERATURE ON VIABILITY OF CAMPYLOBACTER JEJUNI AND CAMPYLOBACTER COLI ON CHICKEN AND PORK SKINS. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. Vol. 66, No. 11, 2003, Pages 2023-2031
Feder, I.E., Gray, J.T., Pearce, R., Bush, E., Fratamico, P.M., Wallace, F.M., Cray, P.J., Perrine, R., Dudley, R.L., Luchansky, J.B. 2002. National animal health monitoring system swine 2000: a surveillance study of escherichia coli 0157 in swine. International Association for Food Protection. P. 87. P120.
Fratamico, P.M., Bhaduri, S., Bush, E.J. 2001. Methods for detection and isolation of bacterial pathogens associated with swine. United States Japan Natural Resources Protein Panel. p. 41-47.
Fratamico, P.M., Bhaduri, S., Bush, E.J. 2001. Methods for detection and isolation of bacterial pathogens associated with swine. United States Japan Natural Resources Protein Panel. p. 41-47.
Fratamico, P.M., Bhaduri, S., Bush, E.J. 2001. Methods for detection and isolation of bacterial pathogens associated with swine. United States Japan Natural Resources Protein Panel. p. 41-47.
Fratamico, P.M., Bhaduri, S., Bush, E.J. 2001. Methods for detection and isolation of bacterial pathogens associated with swine. United States Japan Natural Resources Protein Panel. p. 41-47.