Projects

IMPROVEMENT OF HARD RED SPRING AND DURUM WHEAT FOR DISEASE RESISTANCE AND QUALITY USING GENETICS AND GENOMICS Appropriated (D)   Accession Number: 413121

STRUCTURAL AND FUNCTIONAL ANALYSIS OF GENES CONFERRING SENSITIVITY IN WHEAT TO HOST-SELECTIVE TOXINS PRODUCED BY NECROTROPHIC FUNGI Grant (G)   Accession Number: 415255

STRUCTURAL AND FUNCTIONAL ANALYSIS OF GENES CONFERRING SENSITIVITY IN WHEAT TO HOST-SELECTIVE TOXINS PRODUCED BY NECROTROPHIC FUNGI Reimbursable (R)   Accession Number: 413406

MOLECULAR CHARACTERIZATION OF THE TSN1 LOCUS IN WHEAT Specific Cooperative Agreement (S)   Accession Number: 410522

Publications

Identification and Characterization of a Novel Host-Toxin Interaction in the Wheat - Stagonospora Nodorum Pathosystem - (Peer Reviewed Journal) - (11-Sep-09)

Identification of Novel Tan Spot Resistance QTLs Using an SSR-Based Linkage Map of Tetraploid Wheat - (Peer Reviewed Journal) - (30-Aug-09)

SnTox3 Acts in Effector Triggered Susceptibility to Induce Disease on Wheat Carrying the Snn3 Gene - (Peer Reviewed Journal)

Liu, Z., Faris, J.D., Oliver, R., Tan, K., Solomon, P., Mcdonald, M., Mcdonald, B., Nunez, A., Rasmussen, J., Friesen, T.L., Lu, S. 2009. SnTox3 Acts in Effector Triggered Susceptibility to Induce Disease on Wheat Carrying the Snn3 Gene. PLoS Pathogens. 5:(9) 1-15

Re-Evaluation of a Tetraploid Wheat Population Indicates That the Tsn1-ToxA Interaction is the Only Factor Governing Stagonospora Nodorum Blotch Susceptibility - (Peer Reviewed Journal)

Faris, J.D., Friesen, T.L. 2009. Re-Evaluation of a Tetraploid Wheat Population Indicates That the Tsn1-ToxA Interaction is the Only Factor Governing Stagonospora Nodorum Blotch Susceptibility. Phytopathology. 99:(8) 906-912

Identification of ToxA-Interacting Proteins Suggests a Possible Role for Pathogenesis-Related Protein 1(PR-1) in Mediating Stagonospora Nodorum-wheat Interactions - (Abstract)

Lu, S., Friesen, T.L., Faris, J.D. 2009. Identification of ToxA-Interacting Proteins Suggests a Possible Role for Pathogenesis-Related Protein 1(PR-1) in Mediating Stagonospora Nodorum-wheat Interactions. Meeting Abstract. p. 97.

Identification of Novel QTL for Seeding and Adult Plant Leaf Rust Resistance in a Wheat Doubled Haploid Population - (Peer Reviewed Journal)

Chu, C.G., Friesen, T.L., Xu, S.S., Faris, J.D., Kolmer, J.A. 2009. Identification of Novel QTL for Seeding and Adult Plant Leaf Rust Resistance in a Wheat Doubled Haploid Population. Theoretical and Applied Genetics. 119:263-269

Agronomic and Quality Characteristics of Two New Sets of Langdon Durum ¿ wWld Emmer Wheat Chromosome Substitution Lines - (Peer Reviewed Journal)

Klindworth, D.L., Hareland, G.A., Elias, E.M., Faris, J.D., Chao, S., Xu, S.S. 2009. Agronomic and Quality Characteristics of Two New Sets of Langdon Durum ¿ wWld Emmer Wheat Chromosome Substitution Lines. Journal of Cereal Science 50: 29-35

Host-selective toxins produced by Stagonospora nodorum confer disease susceptibility in adult wheat plants under field conditions - (Peer Reviewed Journal)

Friesen, T.L., Chu, C.G., Liu, Z.H., Xu, S.S., Halley, S., Faris, J.D. 2009. Host-selective toxins produced by Stagonospora nodorum confer disease susceptibility in adult wheat plants under field conditions. Theoretical and Applied Genetics. 118:1489-1497

Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f.sp. tritici - (Peer Reviewed Journal)

Zhong, S., Leng, Y., Friesen, T.L., Faris, J.D., Szabo, L.J. 2009. Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f.sp. tritici. Phytopathology 99:282-289.

The concurrence of Stagonospora nodorum blotch resistance with host-selective toxin insensitivity in tetraploid wheat - (Abstract)

Chu, C., Friesen, T.L., Chao, S., Faris, J.D., Xu, S.S. 2008. The concurrence of Stagonospora nodorum blotch resistance with host-selective toxin insensitivity in tetraploid wheat. National Wheat Genomics Conference (NWGC), December 4-6, 2008, Indianapolis, IN

Map-Based Cloning of the Fungal Toxin Sensitivity Gene Tsn1 in Wheat - (Abstract)

Faris, J.D., Zhang, Z., Lu, H., Reddy, L., Lu, S., Simons, K.J., Fellers, J.P., Friesen, T.L. 2009. Map-Based Cloning of the Fungal Toxin Sensitivity Gene Tsn1 in Wheat. Plant and Animal Genome Conference XVII abstracts p. 305

A Point Mutation Demonstrating the Pleiotropic Effects of the Domestication Gene Q in Hexaploid Wheat - (Abstract)

Zhang, Z., Gill, B.S., Faris, J.D. 2008. A Point Mutation Demonstrating the Pleiotropic Effects of the Domestication Gene Q in Hexaploid Wheat. Plant and Animal Genome Conference XVII, p. 686

Molecular and cytogenetic characterization of a durum wheat Aegilops speltoides chromosome translocation conferring resistance to stem rust - (Peer Reviewed Journal)

Faris, J.D., Xu, S.S., Xiwen, C., Friesen, T.L., Jin, Y. 2008. Molecular and cytogenetic characterization of a durum wheat Aegilops speltoides chromosome translocation conferring resistance to stem rust. Chromosome Research. 16(8): 1097-1105.

A region of barley chromosome 6H harbors multiple major genes associated with net type blotch resistance. - (Peer Reviewed Journal)

Abu, Q.M., Liu, Z., Faris, J.D., Chao, S., Edwards, M.C., Lai, Z., Franckowiak, J.D., Friesen, T.L. 2008. A region of barley chromosome 6H harbors multiple major genes associated with net type blotch resistance. Theoretical and Applied Genetics. DOI 10.10071s00122-008-0860-X

Chromosome Location and Characterization of Genes for Grain Protein Content in Triticum dicoccoides - (Proceedings/Symposium)

Xu, S.S., Klindworth, D.L., Hareland, G.A., Elias, E.M., Faris, J.D., Chao, S. Chromosome Location and Characterization of Genes for Grain Protein Content in Triticum dicoccoides. International Wheat Conference Proceedings. (Eds.) R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp. Sydney University Press. URI: http://hdl.handle.net/2123/3484. ISBN: 9781920899141.

Identification of chromosomes responsible for crown rot resistance in durum wheat - (Proceedings/Symposium)

Zheng, Z., Li, H.B., Ma, J., Chakraborty, S., Faris, J.D., Xu, S.S., Liu, C.J. 2008. Identification of chromosomes responsible for crown rot resistance in durum wheat. International Wheat Conference Proceedings. (Eds.) R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp. Sydney University Press. URI: http://hdl.handle.net/2123/3265. ISBN 9781920899141

Identification, development and validation of markers for marker-assisted selection against the Stagonospora nodorum toxin sensitivity genes Tsn1 and Snn2 in wheat - (Peer Reviewed Journal)

Zhang, Z., Friesen, T.L., Simons, K.J., Xu, S.S., Faris, J.D. 2008. Identification, development and validation of markers for marker-assisted selection against the Stagonospora nodorum toxin sensitivity genes Tsn1 and Snn2 in wheat. Molecular Breeding. DOI 10.1007/S 11032-008-9211-5

Identification, Cloning, and Characterization of Sntox3 Using Heterologous Expression Transformation, and Site Directed Gene Disruption - (Abstract)

Friesen, T.L., Liu, Z.H., Zhang, Z., Faris, J.D., Solomon, P.S., Tan, K.C., Ferguson, H.M., Oliver, R.P. 2008. Identification, cloning, and characterization of sntox3 using heterologous expression transformation, and site directed gene disruption. Meeting Abstract. 7th Mycosphaerella Stagonospora Symposium, Ascona, Switzerland, August 18-22, 2008

Characterization of the Role of Host-Selective Toxins in the Stagonospora Nodorum - Wheat Pathosystem Shows An Inverse Gene-for-Gene Structure - (Abstract)

Friesen, T.L., Liu, Z., Zhang, Z., Solomon, P.S., Oliver, R.P., Faris, J.D. 2008. Characterization of the role of host-selective toxins in the stagonospora nodorum - wheat pathosystem shows an inverse gene-for-gene structure. 7th Mycosphaerella Stagonospora Symposium in Ascona, Switzerland, August 18-22, 2008.

Chromosome engineering to enhance utility of alien-derived stem rust resistance - (Proceedings/Symposium)

Xu, S.S., Dundas, I.S., Pumphrey, M.O., Jin, Y., Faris, J.D., Cai, X., Qi, L.L., Friebe, B.R., Gill, B.S. 2008. Chromosome engineering to enhance utility of alien-derived stem rust resistance. International Wheat Conference Aug 24-29, 2008 Brisbane Australia (Eds.) R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp. Sydney University Press. URI: http://hdl.handle.net/2123/3843. ISBN: 978192089914

Identification of novel tan spot resistance loci beyond the known host-selective toxin insensitivity genes in wheat - (Peer Reviewed Journal)

Chu, C., Friesen, T.L., Xu, S.S., Faris, J.D. 2008. Identification of novel tan spot resistance loci beyond the known host-selective toxin insensitivity genes in wheat. Theoretical and Applied Genetics 117:873-881

Genetics of host-pathogen interactions in the wheat-Stagonospora nodorum pathosystem - (Proceedings/Symposium)

Faris, J.D., Lu, H.J., Zhang, Z., Liu, Z.H., Xu, S.S., Chu, C.G., Abeysekara, N., Fellers, J.P., Cloutier, S., Keller, B., Scofield, S.R., Friesen, T.L. 2008. Genetics of host-pathogen interactions in the wheat-Stagonospora nodorum pathosystem. International Wheat Conference Proceedings. Australia Aug 24-29

Acc homoeoloci and the evolution of wheat genomes - (Peer Reviewed Journal)

Chalupska, D., Lee, H.Y., Faris, J.D., Evrard, A., Chalhoub, B., Haselkorn, R., Gornicki, P. 2008. Acc homoeoloci and the evolution of wheat genomes. Proceedings of the National Academy of Sciences. 105:9691-9696

Genomic analysis of the Snn1 locus on wheat chromosome arm 1BS and the identification of candidate genes - (Peer Reviewed Journal)

Reedy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Faris, J.D. 2008. Genomic analysis of the Snn1 locus on wheat chromosome arm 1BS and the identification of candidate genes. The Plant Genome. 1:55-66

Host specific toxins; effectors of necrotrophic pathogenicity - (Peer Reviewed Journal)

Friesen, T.L., Faris, J.D., Solomon, P.S., Oliver, R.P. 2008. Host specific toxins; effectors of necrotrophic pathogenicity. Cellular Microbiology. 10(7) 1421-1428

Whole Genome Mapping in a Wheat Doubled Haploid Population Using SSRs and TRAPS and the Identification of QTL for Agronomic Traits - (Peer Reviewed Journal)

Chu, C., Xu, S.S., Friesen, T.L., Faris, J.D. 2008. Whole Genome Mapping in a Wheat Doubled Haploid Population Using SSRs and TRAPS and the Identification of QTL for Agronomic Traits. Molecular Breeding. 22:251-266

Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q - (Peer Reviewed Journal)

Faris, J.D., Zhang, Z., Fellers, J.P., Gill, B.S. 2008. Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q. Functional and Integrative Genomics. 8:149-164

Evaluation of seedling resistance to tan spot and Stagonospora nodorum blotch in tetraploid wheat - (Peer Reviewed Journal)

Chu, C.G., Friesen, T.L., Faris, J.D., Xu, S.S. 2008. Evaluation of seedling resistance to tan spot and Stagonospora nodorum blotch in tetraploid wheat. Crop Science. 48:1107-1116

Seedling resistance to tan spot and Stagonospora nodorum leaf blotch in wild emmer wheat (Triticum dicoccoides) - (Peer Reviewed Journal)

Chu, C.G., Xu, S.S., Faris, J.D., Nevo, E., Friesen, T.L. 2007. Seedling resistance to tan spot and Stagonospora nodorum leaf blotch in wild emmer wheat (Triticum dicoccoides). Plant Disease. 92:1239-1236

The emergence of tan spot disease caused by toxigenic Pyrenophora tritici-repentis in Australia is not associated with increased deployment of toxin-sensitive cultivors. - (Peer Reviewed Journal)

Oliver, R.P., Lord, M., Rybak, K., Faris, J.D., Solomon, P.S. 2008. The emergence of tan spot disease caused by toxigenic Pyrenophora tritici-repentis in Australia is not associated with increased deployment of toxin-sensitive cultivors.. Phytopathology. 98:488-191

Genetic characterization of a novel wheat-Stagonospora nodorum host-selective toxin interaction and it role in disease susceptibility - (Peer Reviewed Journal)

Friesen, T.L., Zhang, Z., Solomon, P.S., Oliver, R.P., Faris, J.D. 2008. Genetic characterization of a novel wheat-Stagonospora nodorum host-selective toxin interaction and it role in disease susceptibility. Plant Physiology. 146:682-693

Identification of seed dormancy for four populations derived from synthetic hexaploid wheat - (Abstract)

Gu, X., Ren, S., Chu, C., Glover, K., Xu, S.S., Faris, J.D., Friesen, T.L., Ibrahim, A. 2007. Identification of seed dormancy for four populations derived from synthetic hexaploid wheat. Plant and Animal Genome Conference. December 1-2, 2007 Kansas City MO.

Stagonospora nodorum utilizes a sophisticated inverse gene-for-gene system involving proteinaceous host-selective toxins interacting with dominant wheat sensitivity genes - (Abstract)

Friesen, T.L., Faris, J.D., Liu, Z., Solomon, P.S., Oliver, R.P. 2008. Stagonospora nodorum utilizes a sophisticated inverse gene-for-gene system involving proteinaceous host-selective toxins interacting with dominant wheat sensitivity genes. 9th International Congress of Plant Pathology Abstracts and Proceedings, Torino, Italy, AUg 24-29, 2008.

Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean pathogens - (Abstract)

Oliver, R.P., Solomon, P.S., Hane, J., Ferguson-Hunt, M., Mcdonald, B.A., Faris, J.D., Friesen, T.L. 2008. Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean pathogens. International Congress of Plant Pathology Abstracts and Proceedings. Torino, Italy, August 24-29, 2008.

Progress towards the construction of a sequence-ready physical map of the 3AS chromosome arm of hexaploid wheat - (Abstract)

Gill, B., Li, W., Sehgal, S.K., Faris, J.D., Reddy, L., Devos, K.M., Buell, R., Gornicki, P., Rabinowicz, P.D., Dolezel, J., Simkova, H., Safar, J., Ma, Y., Chen, F., Lucretti, S., You, F.M., Luo, M. 2008. Progress towards the construction of a sequence-ready physical map of the 3AS chromosome arm of hexaploid wheat. Plant and Animal Genome Conference XVI abstracts pg. 9

Molecular Mapping of the leaf rust resistance gene Lr17a in Wheat - (Peer Reviewed Journal)

Barrett, B., Faris, J.D., Fellers, J.P. 2008. Molecular Mapping of the leaf rust resistance gene Lr17a in Wheat. Crop Science.48:1124-1128.

Genetics and Genomics of Wheat Domestication-Driven Evolution - (Proceedings/Symposium)

Gill, B., Li, W., Sood, S., Kuraparthy, V., Friebe, B., Simons, K.J., Zhang, Z., Faris, J.D. 2008. Genetics and Genomics of Wheat Domestication-Driven Evolution Israel Journal of Plant Science. 55:223-229

Toward a better understanding of a major FHB resistance QTL in tetraploid wheat - (Abstract)

Zhu, X., Chen, X., Faris, J.D., Hu, J., Stack, R.S., Adhikari, T., Elias, E.M., Kianian, S.F., Cai, X. 2007. Toward a better understanding of a major FHB resistance QTL in tetraploid wheat. Meeting Abstract. National Wheat Genomics Conference abstracts p. 12

Exploring the functional roles of the Q gene homoeoalleles in wheat - (Abstract)

Zhang, Z., Simons, K.J., Gill, B.S., Faris, J.D. 2007. Exploring the functional roles of the Q gene homoeoalleles in wheat. Meeting Abstract. National Wheat Genomics Abstracts pg. 6

Wheat-rice colinearity and chromosome walking at the Snn1 locus in wheat - (Abstract)

Reddy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Scofield, S.R., Faris, J.D. 2007. Wheat-rice colinearity and chromosome walking at the Snn1 locus in wheat. Meeting Abstract. National Wheat Genomics Conference Abstracts. pg 28

Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q - (Abstract)

Faris, J.D., Zhang, Z., Fellers, J.P., Gill, B.S. 2008. Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q. Plant and Animal Genome Conference XVI abstract pg. 262.

Genomic analysis of the Tsn1 locus and the identification of candidate genes - (Abstract)

Faris, J.D., Lu, H., Zhang, Z., Reddy, L., Fellers, J.P., Friesen, T.L. 2008. Genomic analysis of the Tsn1 locus and the identification of candidate genes. Plant and Animal Genome ConferenceXVI abstracts pg. 305

Whole genome mapping and QTL analysis in a doubled haploid population derived from the cross between a synthetic hexaploid wheat and hard red spring wheat - (Abstract)

Chu, C., Xu, S.S., Friesen, T.L., Faris, J.D. 2007. Whole genome mapping and QTL analysis in a doubled haploid population derived from the cross between a synthetic hexaploid wheat and hard red spring wheat. Meeting Abstract. National Wheat Conference Abstract pg 20.

Genetic analysis of host-toxin interactions in the wheat-Stagonospora nodorum pathosystem - (Abstract)

Faris, J.D., Friesen, T.L., Lu, H., Reddy, L., Zhang, Z., Liu, Z., Xu, S.S., Meinhardt, S.W., Fellers, J.P., Oliver, R.P., Solomon, P.S., Chao, S., Chu, C., Abeysekara, N., Scofield, S.R. 2007. Genetic analysis of host-toxin interactions in the wheat-Stagonospora nodorum pathosystem. Meeting Abstract. National Wheat Genomics Conference abstracts pg. 11

Items from North Dakota: USDA-ARS Cereal Crops Research Unit - (Other)

Faris, J.D., Xu, S.S., Friesen, T.L., Klindworth, D.L., Simons, K.J., Chao, S. 2007. Items from north dakota: usda-ars cereal crops research unit. 2007 Annual Wheat Newsletter. pg. 141-148

Identification and Characterization of Segregation Distortion Loci Along Chromosome 5B in Tetraploid Wheat - (Peer Reviewed Journal)

Kumar, S., Gill, B.S., Faris, J.D. 2007. Identification and Characterization of Segregation Distortion Loci Along Chromosome 5B in Tetraploid Wheat. Molecular Genetics and Genomics. 278:187-196.

The Stagonospora nodorum-wheat pathosystem is an inverse gene-for-gene system involving multiple proteinaceous host-selective toxins - (Peer Reviewed Journal)

Friesen, T.L., Meinhardt, S.W., Faris, J.D. 2007. The Stagonospora nodorum-wheat pathosystem involves multiple proteinaceous host-selective toxins and corresponding host sensitivity genes that interact in an inverse gene-for gene manner. Plant Journal. 51:681-692.

Genetic Mapping and Qtl Analysis of Pyreonphora Teres F. Teres Genes Conferring Avirulence on Barley. - (Peer Reviewed Journal)

Lai, Z., Faris, J.D., Weiland, J.J., Steffenson, B.J., Friesen, T.L. 2007. Genetic mapping of Pyreonphora teres f. teres genes conferring avirulence on barley. Fungal Genetics and Biology. 44:323-329.

Stagonospora nodorum utilizes multiple proteinaceous host selective toxins which interact with dominant host sensitivity genes in wheat - (Abstract)

Friesen, T.L., Faris, J.D., Oliver, R.P. 2007. Stagonospora nodorum utilizes multiple proteinaceous host selective toxins which interact with dominant host sensitivity genes in wheat. Meeting Abstract. 24th Fungal Genetics Conference. p. 168.

The initiation of map-based cloning of an avirulence gene from Pyrenophora teres - (Abstract)

Liu, Z., Faris, J.D., Edwards, M.C., Friesen, T.L. 2006. The initiation of map-based cloning of an avirulence gene from Pyrenophora teres. Meeting Abstract. 24th Fungal Genetics Conference. p. 159.

Interspecific transfer of host-specific toxin genes in Stagonospora nodorum - (Abstract)

Oliver, R.P., Solomon, P.S., Hane, J., Stukenbrock, E.H., Mcdonald, B.A., Liu, Z., Faris, J.D., Friesen, T.L. 2007. Interspecific transfer of host-specific toxin genes in Stagonospora nodorum. Meeting Abstract. 24th Fungal Genetics Conference. p. 61.

Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat - (Peer Reviewed Journal)

Kumar, S., Stack, R.W., Friesen, T.L., Faris, J.D. 2007. Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat. Phytopathology. 97:592-597.

Functional Characterization of Ptr ToxA and Molecular Identification of its Intracellular Targeting Protein in Wheat - (Abstract)

Tai, Y., Bragg, J., Lu, H., Edwards, M.C., Faris, J.D., Friesen, T.L., Meinhardt, S.W. 2007. Functional Characterization of Ptr ToxA and Molecular Identification of its Intracellular Targeting Protein in Wheat. Plant and Animal Genome VX Conference Abstracts. p.

Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat - (Abstract)

Faris, J.D., Kumar, S., Friesen, T.L. 2007. Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat. Plant and Animal Genome VX Conference Abstracts. p. 179.

Molecular characterization of the AP2-like Q gene homoeoallele on chromosome 5D in hexaploid wheat - (Abstract)

Zhang, Z., Simons, K.J., Faris, J.D. 2007. Molecular characterization of the AP2-like Q gene homoeoallele on chromosome 5D in hexaploid wheat. Plant and Animal Genome VX Conference Abstracts. p. 300.

Identification of candidate genes associated with signaling networks regulated by the Q gene in wheat - (Abstract)

Tai, Y., Simons, K.J., Xu, S.S., Faris, J.D. 2007. Identification of candidate genes associated with signaling networks regulated by the Q gene in wheat. Plant and Animal Genome VX Conference Abstracts. p. 300.

Genomic analysis of the Snn1 locus on the short arm of chromosome 1B in wheat - (Abstract)

Reddy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Faris, J.D. 2007. Genomic analysis of the Snn1 locus on the short arm of chromosome 1B in wheat. Plant and Animal Genome VX Conference Abstracts. p. 176.

Delineation of the wheat Tsn1 candidate gene region - (Abstract)

Lu, H., Fellers, J.P., Tai, Y., Meinhardt, S.W., Friesen, T.L., Faris, J.D. 2007. Delineation of the wheat Tsn1 candidate gene region. Plant and Animal Genome VX Conference Abstracts. p. 174.

The Stagonospora nodorum-wheat pathosystem is an inverse gene for gene system involving multiple proteinaceous host selective toxins - (Abstract)

Friesen, T.L., Faris, J.D., Oliver, R. 2007. The Stagonospora nodorum-wheat pathosystem is an inverse gene for gene system involving multiple proteinaceous host selective toxins. Plant and Animal Genome VX Conference Abstracts. p. 179.

Saturation and comparative mapping of a major Fusarium head blight resistance QTL in tetraploid wheat - (Peer Reviewed Journal)

Chen, X., Faris, J.D., Hu, J., Stack, R.W., Adhikari, T., Elias, E.M., Kianian, S.F., Cai, X. 2006. Saturation and comparative mapping of a major Fusarium head blight resistance QTL in tetraploid wheat. Molecular Breeding. 19:113-124.

Genetic Mapping of Pyrenophora Teres Avirulence Genes - (Proceedings/Symposium)

Friesen, T.L., Lai, Z., Liu, Z., Faris, J.D., Steffenson, B.J. 2006. Genetic mapping of pyrenophora teres avirulence genes. In: Proceedings of the 3rd International Workshop on Barley Leaf Blight. July 23-27, 2005, Edmonton, Canada. p.

The Tsn1-Toxa Interaction in the Wheat-Stagonospora Nodorum Pathosystem Parallels That of the Wheat-Tan Spot System - (Peer Reviewed Journal)

Liu, Z., Friesen, T.L., Hua, L., Meinhardt, S.W., Oliver, R., Rassmussen, J.B., Faris, J.D. 2007. The tsn1-toxa interaction in the wheat-stagonospora nodorum pathosystem parallels that of the wheat-tan spot system. Genome. 49:1265-1273.

Emergence of a new disease as a result of interspecific virulence gene transfer - (Peer Reviewed Journal)

Friesen, T.L., Stukenbrock, E.H., Liu, Z., Meinhardt, S., Ling, H., Faris, J.D., Rasmussen, J.B., Solomon, P.S., McDonald, B.A., Oliver, R.P. 2006. Emergence of a new disease as a result of interspecific virulence gene transfer. Nature Genetics. 38(8):953-956.

Identification and Chromosomal Location of Major Genes for Resistance to Pyrenophora Teres F. Teres and P. Teres F. Maculata in Barley Doubled Haploid Population. - (Peer Reviewed Journal)

Friesen, T.L., Faris, J.D., Lai, Z., Steffenson, B.J. 2006. Identification and chromosomal location of major genes for resistance to Pyrenophora teres in a doubled-haploid barley population. Genome. 49:855-859

Molecular Mapping of Hybrid Necrosis Genes Ne1 and Ne2 in Hexaploid Wheat Using Microsatellite Markers. - (Peer Reviewed Journal)

Chu, C.-G, Faris, J.D., Friesen, T.L., Xu, S.S. 2006. Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markers. Theoretical and Applied Genetics. 112:1374-1381.

Genomic Analysis and Marker Devlopment for the Tsn1 Locus in Wheat Using Bin-Mapped Ests and Flanking Bac Contigs. - (Peer Reviewed Journal)

Lu, H., Fellers, J.P., Friesen, T.L., Faris, J.D. 2006. Genomic analysis and marker devlopment for the TSN1 locus in wheat using bin-mapped ests and flanking bac contigs. Theoretical and Applied Genetics. 112:1132-142.

Evaluation of Macro and Microcolinearity Between the Genomic Region of Wheat Chromosome 5b Containing the Tsn1 Gene and the Rice Genome. - (Peer Reviewed Journal)

Lu, H., Faris, J.D. 2006. Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome. Functional and Integrative Genomics. 6:90-103.

Molecular Tagging of Tsn1 in Wheat: Comparing Feasibility of Bin-Mapped Est Markers with Aflp-Bsa and Previously Mapped Rflps and Ssrs - (Abstract)

Lu, H., Faris, J.D. Molecular tagging of tsn1 in wheat: comparing feasibility of bin-mapped est markers with aflp-bsa and previously mapped rflps and ssrs. 2005 American Society of Agronomy Abstracts, p. 310.

Identification of a Fusarium Head Blight Resistance Qtl on Chromosome 6b in Tetraploid Wheat. - (Abstract)

Stack, R., Faris, J.D. 2006. Identification of a fusarium head blight resistance QTL on chromosome 6b in tetraploid wheat [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P285:172.

Molecular Mapping of Hybrid Necrosis Genes Ne1 and Ne2 in Hexaploid Wheat Using Microsatellite Markers - (Abstract)

Chu, C., Faris, J.D., Friesen, T.L., Xu, S.S. 2006. Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markers [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P280:171.

Applications of Functional Genomics in Studies of wheat Domestication and Disease Resistance - (Abstract)

Tai, Y., Faris, J.D., Friesen, T.L., Xu, S.S., Meinhardt, S.W., Stack, R.W., Simons, K., Bragg, J., Edwards, M.C. 2006. Applications of functional genomics in studies of wheat domestication and disease resistance [abstracts]. Plant and Animal Genome XIV Conference. Abstract No. P830:307.

High-Resolution Mapping and Chromosome Walking at the Snn1 Locus on Chromosome 1b in Wheat. - (Abstract)

Reddy, L., Friesen, T.L., Meinhardt, S.W., Faris, J.D. 2006. High-resolution mapping and chromosome walking at the snn1 locus on chromosome 1b in wheat [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P349:188.

Functional Analysis of the Domestication Gene Q in Wheat. - (Abstract)

Zhang, Z., Tai, Y., Simons, K.J., Fellers, J.P., Gill, B.S., Faris, J.D. 2006. Functional analysis of the domestication gene q in wheat [abstract]. Plant and Animal Genome XIV Conference. Abstact No. P828:307.

Saturation Mapping of the Major Fhb Resistance Qtl QFHS.NDSU-3AS in Tetraploid Wheat - (Abstract)

Chen, X., Faris, J.D., Jinguo, H., Stack, R., Adhikari, T., Kianian, S., Cai, X. 2006. Saturation mapping of the major FHB resistance QTL Qfhs.ndsu-3AS in tetraploid wheat. Plant and Animal Genome XIV Conference Abstracts, P291.

Molecular Characterization of the Major Wheat Domestication Gene Q - (Peer Reviewed Journal)

Simons, K.J., Fellers, J.P., Trick, H.N., Zhang, Z., Tai, Y., Gill, B.S., Faris, J.D. 2006. Molecular Characterization of the Major Wheat Domestication Gene Q. Genetics. 172:547-555.

The Wheat Super Domestication Gene Q. (Wheat Information Service, "frontiers of Biosciences") - (Review Article)

Faris, J.D., Simons, K.J., Zhang, Z., Gill, B. 2005. The wheat super domestication gene Q. Frontiers of Wheat Bioscience. 100:129-148.

A New Host Selective Toxin Produced by Stagonospora Nodorum and Its Significance in Disease Using a Segregating Wheat Mapping Population. - (Abstract)

Friesen, T.L., Faris, J.D., Meinhardt, S.W. 2005. A new host selective toxin produced by stagonospora nodorum and its significance in disease using a segregating wheat mapping population. American Phytopathological Society Abstracts. Vol. 95:S32.

Genomic Mapping of Toxin Sensitivity and Quantitative Trait Loci for Seedling Resistance to Stagonospora Nodorum in Wheat. - (Abstract)

Liu, Z.H., Friesen, T.L., Ling, H., Meinhardt, S.W., Rasmussen, J.B., Faris, J.D. 2006. Genomic mapping of toxin sensitivity and quantitative trait loci for seedling resistance to stagonospora nodorum in wheat. Phytopathology. 95:S62

A Wheat Intervarietal Genetic Linkage Map Based on Microsatellite and Target Region Amplified Polymorphism Markers and Its Utility for Detecting Quantitative Trait Loci. - (Peer Reviewed Journal)

Liu, Z., Anderson, J.A., Hu, J., Friesen, T.L., Rasmussen, J.B., Faris, J.D. 2005. A wheat intervarietal genetic linkage map based on microsatellite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci. Theoretical and Applied Genetics. Vol. 111:792-794.

Molecular Cytogenetic Characterization and Seed Storage Protein Analysis of 1a/1d Translocation in Durum Wheat. - (Peer Reviewed Journal)

Xu, S.S., Faris, J.D., Cai, X., Klindworth, D.L. 2005. Molecular cytogenetic characterization and seed storage protein analysis of 1a/1d translocation in durum wheat. Chromosome Research. 13:559-568.

Identification of Quantitative Trait Loci for Race-Nonspecific Resistance to Tan Spot in Wheat. - (Peer Reviewed Journal)

Faris, J.D., Friesen, T.L. 2005. Identification of quantitative trait loci for race-nonspecific resistance to tan spot in wheat. Theoretical and Applied Genetics. Vol. 111:386-392.

Molecular Mapping of Resistance to Pyrenophora Tritici-Repentis Race 5 Sensitivity to Ptrtoxb in Wheat. - (Abstract)

Faris, J.D., Friesen, T.L. 2004. Molecular mapping of resistance to pyrenophora tritici-repentis race 5 sensitivity to ptrtoxb in wheat.. Plant and Animal Genome Abstracts pg. 186.

Utilization of Molecular Markers in the Characterization and Development of Germplasm of and Genetic Stocks in Wheat. - (Abstract)

Xu, S.S., Faris, J.D., Klindworth, D.L., Cai, X., Hu, J. 2004. Utilization of molecular markers in the characterization and development of germplasm of and genetic stocks in wheat.. Plant and Animal Genome Abstracts. [Online.]Available at http://www.intl-pag.org/13/abstracts/PAG13_W225.html. Plant & Animal Genomes XIII Conference, January 15-19, 2005. San Diego, CA.

Molecular Cytogenetic Characterization and Seed Storage Protein Analysis of 1a/1d Translocation Lines of Durum Wheat Carrying Glu-Dld. - (Abstract)

Xu, S.S., Faris, J.D., Cai, X., Klindworth, D.L. 2004. Molecular cytogenetic characterization and seed storage protein analysis of 1a/1d translocation lines of durum wheat carrying glu-dld.. Plant and Animal Genome Abstracts.[Online.] Available at http://www.intl-pag.org/13/abstracts/PAG13_P239.html. Plant & Animal Genomes XIII Conference, January 15-19, 2005. San Diego,CA.

Targeting Tsn1 in Wheat: Colinearity Wityh Rice, Chromosome Walking, and Marker-Assisted Selection. - (Abstract)

Faris, J.D., Lu, H., Friesen, T.L., Haen, K.M., Fellers, J.P., Xu, S.S., Meinhardt, S.W. 2005. Targeting Tsn1 in wheat: colinearity with rice, chromosome walking, and marker-assisted selection. Plant and Animal Genome Abstracts. p. 195.

A Floral Homeotic Gene Key to the Domestication of Wheat. - (Abstract)

Faris, J.D., Simons, K.J., Fellers, J.P., Trick, H.N., Gill, B.S. 2005. A floral homeotic gene key to the domestication of wheat. Plant and Animal Genome Abstracts. p. 186.

Comparative Analyses of a Gene Rich Region of Wheat Chromosome 5b with Rice Using Expressed Sequences. - (Abstract)

Lu, H., Faris, J.D. Comparative analyses of a gene rich region of wheat chromosome 5b with rice using expressed sequences.. Plant and Animal Genome XIII Abstracts p. 259.

Mapping of Toxin Sensitivity and Qtl Analysis of Seedling Resistance to Stagonospora Nodorum Blotch in An Intervarietal Hard Red Spring Wheat Population. - (Abstract)

Liu, Z., Friesen, T.L., Meinhardt, S.W., Rasmussen, J.B., Faris, J.D. 2005. Mapping of toxin sensitivity and QTL analysis of seedling resistance to stagonospora nodorum blotch in an intervarietal hard red spring wheat population. Plant and Animal Genome Abstracts. p. 342.

A Hard Red Spring Wheat Intervarietal Genetic Linkage Map Constructed Using Microsatellite and Target Region Amplification Polymorphism (Trap) Markers. - (Abstract)

Liu, Z., Friesen, T.L., Rasmussen, J.B., Hu, J., Faris, J.D. 2005. A hard red spring wheat intervarietal genetic linkage map constructed using microsatellite and target region amplification polymorphism (TRAP) markers.Plant and Animal Genome Abstracts. p.351.

Isolation and Characterization of the Major Domestication Gene Q in Wheat. - (Abstract)

Simons, K.J., Fellers, J.P., Trick, H.N., Gill, B.S., Faris, J.D. 2005. Isolation and characterization of the major domestication gene Q in wheat.. Plant and Animal Genome Abstracts. p. 72.

Towards Positional Cloning of the Tsn1 Gene in Wheat. - (Abstract)

Lu, H., Fellers, J.P., Friesen, T.L., Meinhardt, S.W., Haen, K.M., Faris, J.D. 2005. Towards positional cloning of the Tsn1 gene in wheat. Plant and Animal Genome Abstracts. p. 359.

Mapping of a Major Net Blotch Resistance Gene in the Q21861 X Sm89010 Doubled Haploid Population. - (Abstract)

Friesen, T.L., Faris, J.D., Steffenson, B.J. 2004. Mapping of a major net blotch resistance gene in the Q21861 x SM89010 doubled haploid population.. American Phytopathological Society Abstracts. Vol. 91:532

Genetic and Physical Mapping Opf a Gene Conditioning Sensitivity in Wheat to a Partially Purified Host-Selective Toxin Produced by Stagonospora Nodorum. - (Peer Reviewed Journal)

Liu, Z.H., Faris, J.D., Meinhardt, S.W., Ali, S., Rasmussen, J.B., Friesen, T.L. 2004. Genetic and physical mapping opf a gene conditioning sensitivity in wheat to a partially purified host-selective toxin produced by stagonospora nodorum. Phytopathology. Vol. 94:1056-1060.

Qtl Analysis and Mapping of Resistance to Stagonospora Nodorum Leaf Blotch in Wheat. - (Peer Reviewed Journal)

Liu, Z.H., Friesen, T.L., Rasmussen, J.B., Ali, S., Meinhardt, S.W., Faris, J.D. 2004. Qtl analysis and mapping of seedling resistance to stagonospora nodorum leaf blotch in wheat.. Phytopathology. Vol.94:1061-1067.

Positional Cloning of the Q Gene in Wheat (Abstract for the 2004 International Triticeae Mapping Initiative Workshop Proceedings. Mpls Mn, May 22-25, 2004. - (Abstract)

Faris, J.D., Gill, B.S., Simons, K.J., Fellers, J.P., Trick, H.N. 2004. Positional cloning of the Q gene in wheat. International Triticeae Mapping Initiative Workshop Proceedings. May 22-25, 2004, Minneapolis, MN. 2004 Program Abstracts. p. 22.

Genome Mapping - (Review Article)

Faris, J.D., Friebe, B., Gill, B.S. 2004. Genome mapping. Encyclopedia of Grain Science. p. 7-16.

Items from North Dakota: the USDA-ARS Cereal Crops Research Unit. - (Other)

Faris, J.D., Friesen, T.L., Xu, S.S. 2004. Items from north dakota: the usda-ars cereal crops research unit.. Wheat Newsletter. vol. 50:252-257

Molecular Mapping of Resistance to Pyrenophora Tritici-Repentis Race 5 and Sensitivity to Ptr Toxb in Wheat. - (Peer Reviewed Journal)

Friesen, T.L., Faris, J.D. 2004. Molecular mapping of resistance to pyrenophora tritici-repentis race 5 and sensitivity to ptr toxb in wheat.. Theoretical and Applied Genetics. Vol. 109:464-471.

Genomic Targeting and High-Resolution Mapping of the Tsn1 Gene in Wheat. - (Peer Reviewed Journal)

Haen, K.M., Lu, H., Friesen, T.L., Faris, J.D. 2004. Genomic targeting and high-resolution mapping of the tsn1 gene in wheat. Crop Science. Vol 44:951-962.

Mapping of Wheat Sensitivity to a Partially Purified Host-Selective Toxin Produced by Stagonospora Nodorum. - (Proceedings/Symposium)

Liu, Z., Friesen, T.L., Faris, J.D., Meinhardt, S., Ali, S., Rasmussen, J. 2003. Mapping of wheat sensitivity to a partially purified host-selective toxin produced by Stagonospora nodorum. Proceedings of the 6th International Symposium on Septoria/Stagonospora Diseases of Cereals. Dec. 8-12, 2003, Tunis, Tunisia. p. 139-142.

Trap (Target Region Amplification Polymorphism) Technique and Its Application to Crop Genomics - (Abstract)

Hu, J., Miller, J.F., Xu, S.S., Faris, J.D., Miklas, P.N., Ochoa, O., Truco, M., Berville, A., Vick, B.A. 2004. Trap (target region amplification polymorphism) technique and its application to crop genomics [abstract]. Plant and Animal Genome XII Abstracts, January 10-14, 2004, San Diego, CA. W169. p. 47.

Genomic Targeting and High-Resolution Mapping of the Tsn1 Gene in Wheat. - (Abstract)

Haen, K.M., Lu, H., Friesen, T.L., Faris, J.D. 2004. Genomic targeting and high-resolution mapping of the Tsn1 gene in wheat. 12th Plant and Animal Genome Abstracts. p. 438.

Chromosomal Location of Genes for Novel Glutenins and Gliadins in Emmer Wheat (Triticum Turgidum L. Var. Dicoccoides). - (Peer Reviewed Journal)

Xu, S.S., Khan, K., Klindworth, D.L., Faris, J.D., Nygard, G. 2004. Chromosomal location of genes for novel glutenins and gliadins in emmer wheat (triticum turgidum l. var. dicoccoides). Theoretical and Applied Genetics. Vol. 108:1221-1228.

High-Throughput Marker Identification and Mapping in Wheat Using Traps (Target Region Amplification Polymorphism). - (Abstract)

Faris, J.D., Xu, S.S., Liu, Z., Hu, J. 2004. High-throughput marker identification and mapping in wheat using traps (target region amplification polymorphism). Plant and Animal Genomes XII Conference Abstracts. January 10-14, 2004. San Diego, CA. p. 120.

Qtl Analysis and Mapping of Resistance to Stagonospora Nodorum Leaf Blotch in Wheat - (Abstract)

Liu, Z., Friesen, T.L., Meinhardt, S., Ali, S., Rasmussen, J.B., Faris, J.D. 2004. QTL analysis and mapping of resistance to Stagonospora nodorum leaf blotch in wheat. 12th Plant and Animal Genome Abstracts. p. 459.

Genetic and Physical Mapping of a Gene Conditioning Sensitivity in Wheat to a Partially Purified Host-Selective Toxin by Stagonospora Nodorum. - (Abstract)

Liu, Z., Faris, J.D., Meinhardt, S., Ali, S., Rasmussen, J., Friesen, T.L. 2004. Genetic and physical mapping of a gene conditioning sensitivity in wheat to a partially purified host-selective toxin by stagonospora nodorum.. Plant and Animal Genome Abstracts. p.185.

Chromosomal Location of Genes for Novel Glutenins and Gliadins in Wild Emmer Wheat. - (Abstract)

Xu, S.S., Khan, K., Klindworth, D.L., Faris, J.D., Nygard, G. 2004. Chromosomal location of genes for novel glutenins and gliadins in wild emmer wheat. 12th Plant and Animal Genome Abstracts.p. 178.

Molecular Cloning of the Q Locus in Wheat. - (Abstract)

Simons, K., Fellers, J.P., Trick, H., Gill, B.S., Faris, J.D. 2004. Molecular cloning of the Q locus in wheat. Plant and Animal Genome Abstracts. p. 110.

The Construction of a Bac Contig for Chromosome Walking at the Tsn1 Locus in Wheat. - (Abstract)

Lu, H., Haen, K., Fellers, J.P., Friesen, T.L., Heinhardt, S., Faris, J.D. 2004. The construction of a BAC contig for chromosome walking at the Tsn1 locus in wheat.. Plant and Animal Genome Abstracts. p. 180.

Evaluation of Langdon Durum-Aegilops Tauschii Synthetic Hexaploid Wheats for Reaction to Tan Spot, Stagonospora Leaf Blotch, Leaf Rust, Stem Rust, and Hessian Fly. - (Proceedings/Symposium)

FRIESEN, T.L., XU, S.S., FARIS, J.D., RASMUSSEN, J.B., MILLER, J.D., HARRIS, M. EVALUATION OF LANGDON DURUM-AEGILOPS TAUSCHII SYNTHETIC HEXAPLOID WHEATS FOR REACTION TO TAN SPOT, STAGONOSPORA LEAF BLOTCH, LEAF RUST, STEM RUST, AND HESSIAN FLY.. WHEAT GENETICS INTERNATIONAL SYMPOSIUM PROCEEDINGS. 2003. VOL. 3:1133-1135.

Molecular Characterization of the Langdon Durum-Triticum Dicoccoides Chromosome Substitution Lines Using Trap (Target Region Amplification Polymorphism) Markers - (Abstract)

Xu, S.S., Hu, J., Faris, J.D. 2003. Molecular characterization of the Langdon durum-Triticum dicoccoides chromosome substitution lines using TRAP (target region amplification polymorphism) markers. 10th Wheat Genetics International Symposium Proceedings. September, 1-6, 2003, Paestum, Italy. Abstract not published separately - published in proceedings. Vol. 1:91-94.

Molecular Characterization of the Langdon Durum-Triticum Dicoccoides Chromosome Substitution Lines Using Target Region Amplification Polymorphism (Trap) Markers. - (Proceedings/Symposium)

XU, S.S., HU, J., FARIS, J.D. MOLECULAR CHARACTERIZATION OF THE LANGDON DURUM-TRITICUM DICOCCOIDES CHROMOSOME SUBSTITUTION LINES USING TARGET REGION AMPLIFICATION POLYMORPHISM (TRAP) MARKERS.. WHEAT GENETICS INTERNATIONAL SYMPOSIUM PROCEEDINGS. 2003. VOL. 1:91-94.

Evaluation of Langdon Durum-Aegilops Tauschii Synthetic Hexaploid Wheats for Their Seedling Reaction to Tan Spot, Stagonaspora Leaf Blotch, Leaf Rust, Stem Rust, and Hessian Fly - (Abstract) - (20-Jun-03)

Items from North Dakota: the USDA-ARS Cereal Crops Research Unit - (Other)

Faris, J.D., Friesen, T.L., Xu, S.S. 2003. Items from North Dakota: The USDA-ARS Cereal Crops Research Unit. Wheat Newsletter. Vol. 215-218.

A Bacterial Artificial Chromosome Contig Spanning the Major Domestication Locus Q in Wheat and Identification of a Candidate Gene - (Peer Reviewed Journal)

FARIS, J.D., FELLERS, J.P., BROOKS, S.A., GILL, B.S. A BACTERIAL ARTIFICIAL CHROMOSOME CONTIG SPANNING THE MAJOR DOMESTICATION LOCUS Q IN WHEAT AND IDENTIFICATION OF A CANDIDATE GENE. GENETICS. 2003. VOL. 164:311-321.

Items from North Dakota: the USDA-ARS Cereal Crops Research Unit - (Other)

Faris, J.D., Miller, J.D., Klindworth, D.L. Items from north dakota: the usda-ars cereal crops research unit. Annual Wheat Newsletter 48:249-251.

Genes Encoding Plastid Acetyl-Coa Carboxylase and 3-Phosphoglycerate Kinase of the Triticum/aegilops Complex and the Evolutionary History of Polyploid Wheat. - (Proceedings/Symposium)

Huang, S., Sirikhachornkit, A., Su, X., Faris, J.D., Gill, B., Haselkorn, R., Gornicki, P. 2002. Genes encoding plastid acetyl-coa carboxylase and 3-phosphoglycerate kinase of the triticum/aegilops complex and the evolutionary history of polyploid wheat. Proceedings of the National Academy of Sciences WA 99:8133-8138.