Projects

Reduction of Nutrient Losses and Aerial Emissions from Livestock Production Facilities Appropriated (D)   Accession Number: 409714

Identification of Enzymatic Processes for Breakdown of Crystalline Cellulose (U of Wa) Grant (G)   Accession Number: 418140

Identification of Enzymatic Processes for Breakdown of Crystalline Cellulose (Georgia Institute) Grant (G)   Accession Number: 418147

Identification of Enzymatic Processes for Breakdown of Crystalline Cellulose (Vital Probes) Grant (G)   Accession Number: 418139

Identification of Enzymatic Processes for Breakdown of Crystalline Cellulose Reimbursable (R)   Accession Number: 418064

Publications

Evaluation of elevated dietary corn fiber from corn germ meal in growing female pigs - (Peer Reviewed Journal) - (21-Sep-09)

Phosphitylation and Quantitative 31P-NMR Analysis of Partially Substituted Biodiesel Glycerols - (Peer Reviewed Journal)

Nagy, M., Kerr, B.J., Ziemer, C.J., Ragauskas, A.J. 2009. Phosphitylation and Quantitative 31P-NMR Analysis of Partially Substituted Biodiesel Glycerols. Fuel. 88:1793-1797.

Fate and Transport of Zoonotic Bacterial, Viral, and Parasitic Pathogens During Swine Manure Treatment, Storage, and Land Application - (Abstract)

Ziemer, C.J., Bonner, J. 2009. Fate and Transport of Zoonotic Bacterial, Viral, and Parasitic Pathogens During Swine Manure Treatment, Storage, and Land Application [abstract]. In: Proceedings of 2009 Joint Annual Meeting of American Dairy Science Association, Canadian Society of Animal Science, and American Society of Animal Science, July 12-16, 2009, Montreal, Quebec, Canada. 2009 CDROM.

Isolation and Identification of Fiber-utilizing Bacteria From Pigs - (Abstract)

Kerr, B.J., Ziemer, C.J. 2009. Isolation and Identification of Fiber-utilizing Bacteria From Pigs [abstract]. In: Proceedings of the American Society Microbiology 109th General Meeting, May 17-21, 2009, Philadelphia, PA 2009 CDROM.

Modification of composition and spatial distribution of intestinal microbiota following antibiotic therapy in immunocompetent defined flora C3H/HeN mice - (Abstract)

Overstreet, A., Jergens, A., Ramer-Tait, A., Gallup, J., Ziemer, C.J., Atherly, T.A., Wannemuehler, M. 2009. Modification of composition and spatial distribution of intestinal microbiota following antibiotic therapy in immunocompetent defined flora C3H/HeN mice [abstract]. In: Proceedings of Digestive Disease Week, May 31-June 4, 2009, Chicago, IL CDROM.

Isolation of fiber degrading bacteria from pig feces - (Abstract)

Ziemer, C.J., Kerr, B.J. 2009. Isolation of fiber degrading bacteria from pig feces. In: Proceedings of the Conference on Gastroinestinal Function, April 20-22, 2009, Chicago, IL. Microb. Ecol. 57:587.

Effect of corn germ meal inclusion in pig diets on microbial ecology in the ileum, cecum and colon - (Proceedings/Symposium)

Ziemer, C.J., Weber, T.E., Kerr, B.J. 2008. Effect of Corn Germ Meal Inclusion in Pig Diets on Microbial Ecology in the Ileum, Cecum and Colon. In: Proceedings of the 2nd ASM Conference on Beneficial Microbes, Oct. 12-16, 2008, San Diego, CA. p. 53.

Dietary Protein and Cellulose Effects on Chemical and Microbial Characteristics of Swine Feces and Stored Manure - (Peer Reviewed Journal)

Ziemer, C.J., Kerr, B.J., Trabue, S.L., Stein, H., Stahl, D.A., Davidson, S.K. 2009. Dietary Protein and Cellulose Effects on Chemical and Microbial Characteristics of Swine Feces and Stored Manure. Journal of Environmental Quality. 38(5):2138-2146.

Bacterial Hazards Associated with Swine Wastes - (Other)

Ziemer, C.J., Mackie, R.I. 2008. Bacterial Hazards Associated with Swine Wastes. Scientific and Technical Review. Special Publication No. 29.

Archaea in the intestinal tract of pigs - (Abstract)

Ziemer, C.J., Weber, T.E., Kerr, B.J. 2008. Archaea in the intestinal tract of pigs [abstract]. 12th International Symposium on Microbial Ecology, August 17-22, 2008, Cairns, Australia. 2008 CDROM.

Affect of corn germ meal inclusion in pig diets bacterial ecology in the cecum and proximal colon - (Abstract)

Ziemer, C.J., Weber, T.E., Kerr, B.J. 2008. Affect of corn germ meal inclusion in pig diets bacterial ecology in the cecum and proximal colon [abstract]. 12th International Symposium on Microbial Ecology, August 17-22, 2008. Cairns, Australia. 2008 CDROM.

Animal Emissions Analyzed by both Chemical and Odor Panel Methods - (Proceedings/Symposium)

Trabue, S.L., Kerr, B.J., Ziemer, C.J., Bearson, B.L. 2008. Animal Emissions Analyzed by both Chemical and Odor Panel Methods. Proceedings of the Air & Waste Management Association Annual Meeting, June 24-27, 2008, Portland, OR. 2008 CDROM.

Comparative sulfur analysis using thermal combustion or inductively coupled plasma methodology and mineral composition of common livestock feedstuffs - (Peer Reviewed Journal)

Kerr, B.J., Ziemer, C.J., Weber, T.E., Trabue, S.L., Bearson, B.L., Shurson, G.C., Whitney, M.H. 2008. Comparative sulfur analysis using thermal combustion or inductively coupled plasma methodology and mineral composition of common livestock feedstuffs. Journal of Animal Science. 86(9):2377-2384.

Helicobacter bilis infection alters the spatial distribution of commensal bacteria in colitic C3H/HeN mice - (Abstract)

Jergens, A., Ziemer, C.J., Atherly, T.A., Doyle, R., Wilson-Welder, J., Dorn, A., Henderson, A., Liu, Z., Clausen, K., Wannemuehler, M. 2008. Helicobacter bilis infection alters the spatial distribution of commensal bacteria in colitic C3H/HeN mice [abstract]. In: Proceedings of Digestive Disease Week, May 17-22, 2008, San Diego, California.

Effects of adding fibrous feedstuffs to the diet of young pigs on growth performance, intestinal cytokines, and circulating acute phase proteins - (Peer Reviewed Journal)

Weber, T.E., Ziemer, C.J., Kerr, B.J. 2008. Effects of adding fibrous feedstuffs to the diet of young pigs on growth performance, intestinal cytokines, and circulating acute phase proteins. Journal of Animal Science. 86:871-881.

Effects of aging on microbial ecology in swine manure - (Abstract)

Ziemer, C.J., Kerr, B.J., Trabue, S.L., Bearson, B.L. 2007. Effects of aging on microbial ecology in swine manure [abstract]. 107th ASM General Meeting, May 21-25, 2007, Toronto, Ontario, Canada. 2007 CDROM.

Application of quantitative PCR assays to detection of human Bacteroides species in the intestines of pigs - (Abstract)

Ziemer, C.J., Wimmer, M. 2007. Application of quantitative PCR assays to detection of human Bacteroides species in the intestines of pigs [abstract]. In: Proceedings of Microbial Ecology in Health and Diseases, Conference on Gastrointestinal Function, April 17-18, 2007, Chicago, Illinois. 19:44.

Effects of biological pit additives on microbial ecology of stored pig manure - (Abstract)

Ziemer, C.J., Coate, E.A., Kerr, B.J., Trabue, S.L. 2007. Effects of biological pit additives on microbial ecology of stored pig manure [abstract]. In: Proceedings of Microbial Ecology in Health and Disease, Conference on Gastrointestinal Function, April 17-18, 2007, Chicago, Illinois. 19:38.

Bacteria Isolated from Long-Term Fermentations of Swine Feces Fed Xylan and Pectin - (Proceedings/Symposium)

Ziemer, C.J., Morrison, M. 2006. Bacteria isolated from long-term fermentations of swine feces fed xylan and pectin. In: Proceedings of Microbial Ecology International Symposium. 11th International Symposium on Microbial Ecology, August 20-25, 2006, Vienna, Austria. 2007 CDROM.

Isolation of Previously Uncultured Bacteria from Long-Term Fermentations of Swine Feces Fed Cellulose. - (Proceedings/Symposium)

Ziemer, C.J., Morrison, M. 2006. Isolation of previously uncultured bacteria from long-term fermentations of swine feces fed cellulose. In: Proceedings of Microbial Ecology International Symposium, 11th International Symposium on Microbial Ecology, August 20-25, 2006, Vienna, Austria. 2006 CDROM.

Manure Composition of Swine As Affected by Dietary Protein and Cellulose Concentration - (Peer Reviewed Journal)

Kerr, B.J., Ziemer, C.J., Trabue, S.L., Crouse, J.D., Parkin, T.B. 2006. Manure composition of swine as affected by dietary protein and cellulose concentration. Journal of Animal Science. 84:1584-1592.

Cross Polarization/magic Angle Sample (Cp/mas) Nuclear Magnetic Resonance (Nmr) Analysis of Cellulase Treated Bleached Softwood Kraft Pulp - (Peer Reviewed Journal)

Pu, Y., Ziemer, C.J., Ragauskas, A.J. 2006. Cross polarization/magic angle sample (CP/MAS) nuclear magnetic resonance (NMR) analysis of cellulase treated bleached softwood kraft pulp. Journal of Carbohydrate Chemistry. 341(5):591-597.

Development of Clostridial Specific Denaturing Gradient Gel Electrophoresis Analysis for Assessment of Swine Intestinal, Fecal and Manure Samples - (Abstract)

Ziemer, C.J., Atherly, T.A. 2005. Development of clostridial specific denaturing gradient gel electrophoresis analysis for assessment of swine intestinal, fecal and manure samples. American Society for Microbiology Branch Meeting. p.63.

Manure Composition As Affected by Dietary Protein and Cellulose Concentration - (Proceedings/Symposium)

Ziemer, C.J., Kerr, B.J., Trabue, S.L., Crouse, J.D., Powers, W. 2005. Manure composition as affected by dietary protein and cellulose concentration. Meeting Proceedings.

Comparison of Microbial Communities in Cecal and Fecal Samples from Pigs Fed Two Levels of Cellulose and Protein. - (Abstract)

Ziemer, C.J., Davidson, S.K., Stahl, D.A., Kerr, B.J. 2004. Comparison of microbial communities in cecal and fecal samples from pigs fed two levels of cellulose and protein.. Meeting Proceedings. p. 267.

Evaluation of the Specificity of Salmonella Pcr Primers Using Various Intestional Bacteria Species. - (Peer Reviewed Journal)

Ziemer, C.J., Steadham, S.R. 2003. Evaluation of the specificity of salmonella pcr primers using various intestional bacteria species.. Letters in Applied Microbiology. p. 463-469.

Preslaughter Holding Environment in Pork Plants Is Highly Contaminated with Salmonella Enterica - (Peer Reviewed Journal)

ROSTAGNO, M.H., HURD, H.S., MCKEAN, J.D., ZIEMER, C.J., GAILEY, J.K., LEITE, R.C. PRESLAUGHTER HOLDING ENVIRONMENT IN PORK PLANTS IS HIGHLY CONTAMINATED WITH SALMONELLA ENTERICA. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2003. V. 69. P. 4489-4494.

Presence and Expression of Tetracycline Genes in Salmonella - (Abstract)

Ziemer, C.J., Dang, E. 2003. Presence and expression of tetracycline genes in salmonella. Conference on Gastrointestinal Function. p. 54.

Some Pcr Primer Pairs Targeting Salmonella Also Amplify Gut Associated Bacteria - (Abstract)

Ziemer, C.J., Steadham, S.R. 2002. Some pcr primer pairs targeting salmonella also amplify gut associated bacteria. North Central Branch of the American Society for Microbiology. p. 12.

Salmonella Infection in Market Swine During Pre-Slaughter Holding - (Proceedings/Symposium)

ROSTAGNO, M.H., HURD, H.S., MCKEAN, J.D., ZIEMER, C.J., GAILEY, J.K., LEITE, R.C. SALMONELLA INFECTION IN MARKET SWINE DURING PRE-SLAUGHTER HOLDING. CONGRESS OF THE PIG VETERINARY SOCIETY. 2002. P. 319.