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United States Department of Agriculture

Agricultural Research Service

Fang Publications
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57.       Fang, H., Zhou, H., Sanogo, S., Lipka, A.E., Fang, D.D.,  Percy, R.G., Hughs, S.E.,  Jones, D.C., Gore, M., and Zhang, J. Genetic and quantitative trait locus analysis of Verticillium wilt resistance in an introgressed recombinant inbred population of Upland cotton. Molecular Breeding. DOI 10.1007/s11032-013-9987-9. 2014. 


56.            Gore, M.A.§, Fang, D.D.§, Poland, J.A., Zhang, J., Percy, R.G., Cantrell, R.G. and Thyssen, G. Linkage map construction and QTL analysis of agronomic and fiber quality traits in an introgressed recombinant inbred population of cotton (Gossypium hirsutum L.). The Plant Genome. DOI: 10.3835/plantgenome2013.07.0023. 2014. (§ co-first author)


55.            Kim, H.J., Tang, Y., Moon, H.S., Delhom, C.D., and Fang, D.D. Functional analyses of cotton (Gossypium hirsutum L.) immature fiber (im) mutant reveal that fiber cell wall development is associated with sensitivity to stress. BMC Genomics. 14:889. 2013.


54.       Thyssen, G., McCarty, J.C., Li, P., Jenkins, J.N. and Fang, D.D. Genetic mapping of non-target site resistance to a sulfonylurea herbicide (Envoke®) in Upland cotton (Gossypium hirsutum L.). Molecular Breeding. DOI 10.1007/s11032-013-9953-6. 2013.


53.       Gilbert, M.K., Bland, J.M., Shockey, J., Cao, H., Hinchliffe, D.J., Fang, D.D., and Naoumkina, M.  A transcript profiling approach reveals an abscisic acid specific glycosyltransferase (UGT73C14) induced in developing fiber of Ligon lintless-2 mutant of cotton (Gossypium hirsutum L.). PLoS ONE. 8(9):e75268. 2013


52.       Gilbert, M.K., Turley, R.B., Kim, H.J., Li, P., Thyssen, G., Tang, Y., Delhom, C.D., Naoumkina, M., and Fang, D.D. Transcript profiling by microarray and marker analysis of the short cotton (Gossypium hirsutum L.) fiber mutant Ligon lintlesss-1 (Li1).  BMC Genomics. 14:403. 2013.


51.       Naoumkina, M., Hinchliffe, D.J., Turley, R.B., Bland, J., and Fang, D.D. Integrated metabolomics and genomics analysis provides new insights into the fiber elongation process in Ligon lintless-2 (Li2) mutant cotton (Gossypium hirsutum L.). BMC Genomics. 14:155. 2013.


50.       Fang, D.D., Hinze, L.L., Percy, R.G., Li, P., Deng, D., and Thyssen, G. A microsatellite-based genome-wide analysis of genetic diversity and linkage disequilibrium in Upland cotton (Gossypium hirsutum L.) cultivars from major cotton-growing countries. Euphytica. 191:391-401. 2013


49.       Kim, H.J., Moon, H.S., Delhom, C.D.,  Zeng, L.,  and Fang, D.D. Molecular markers  associated with the immature fiber (im) gene affecting the degree of fiber cell wall thickening in cotton (Gossypium hirsutum L.). Theoretical and Applied Genetics. 126:23-31. 2013.




48.       Blenda, A., Fang, D.D., Rami, J.F., Garsmeur, O., Luo, F., and Lacape, J.M. A high density consensus genetic map of  tetraploid cotton that integrates multiple component maps through molecular marker redundancy  check. PLoS ONE. 7(9):e45739. 2012.


47.       Fang, D. D., and Yu, J. Z. Addition of four-hundred fifty-five microsatellite marker loci to the high-density Gossypium hirsutum tm-1 x G. barbadense 3-79 genetic map. Journal of Cotton Science. 16:229-248. 2012.


46.            Han, X. Y.,  Xu, X. Y.,  Fang, D. D., Zhang, T. Z., and Guo, W. Z. Cloning and expression analysis of novel Aux/IAA family genes in Gossypium hirsutum. Gene. 503:83-91. 2012


45.            Yu, J. Z., Fang, D. D., Kohel, R. J., Ulloa, M.,  Hinze, L. L., Percy, R. G., Zhang, J., Chee, P., Scheffler, B. E.,  and Jones, D. C. Development of Core SSR Markers for Characterization of Gossypium Germplasm. Euphytica. 187:203-213. 2012


44.            Kim, H.J., Triplett, B. A.,  Zhang, H. B., Lee, M. K.,  Hinchliffe, D. J.,  Li, P.,  Fang, D. D. Cloning and molecular characterization of homeologous cellulose synthase catalytic subunit 2 genes from allotetraploid cotton (Gossypium hirsutum L.). Gene. 494:181-189. 2012


43.            Yu, J. Z., Kohel, R. J., Fang, D. D., Cho, J., Van Deynze, A., Ulloa, M.,    Hoffman, S. M.,  Pepper, A. E., Stelly, D. M., Jenkins, J. N., Saha, S., Kumpatla, S. P., Shah, M. R., Hugie, W. V., and Percy, R. G. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3, Genes/Genomes/Genetics. 2:43-58. 2012.


42.            Gore, M., Percy, R. G., Zhang, J., Fang, D. D., and Cantrell, R. G. Registration of the TM-1/NM24016 cotton recombinant inbred mapping population. Journal of Plant Registrations 6:124-127. 2012.





41.            Fang, D. D. and Stetina, S. R. Improving cotton (Gossypium hirsutum L.) plant resistance to reniform nematodes by pyramiding Ren1 and Ren2. Plant Breeding 130:673-678. 2011.


40.            Hinchliffe, D. J.,Turley, R. B., Naoumkina, M., Kim, H. J., Tang, Y. H., Yeater, K. M., Li, L., Fang, D. D. A combined functional and structural genomics approach identifies an EST-SSR marker with complete linkage to the Ligon lintless-2 genetic locus in cotton (Gossypium hirsutum L.). BMC Genomics 12:445. 2011.


39.            Hinchliffe, D. J., Meredith, W. R., Delhom, C. D., Thibodeaux, D. P. and Fang, D. D. Elevated growing degree days influence transition stage timing during cotton (Gossypium hirsutum L.) fiber development and result in increased fiber strength. Crop Science 51:1683-1692. 2011.


38.            Kim, H. J., Murai, N., Fang, D. D., and Triplett, B. A.  Auxin is involved in transcriptional regulation of Gossypium hirsutum cellulose synthase catalytic subunit 4 in transgenic Arabidopsis and cultured cotton fibers. Plant Science 180:323-332. 2011.





37.            Fang, D. D., Xiao, J., Canci, P. C., and Cantrell, R. G.  A new SNP haplotype associated with blue disease resistance gene in cotton (Gossypium hirsutum L.). Theoretical and Applied Genetics 120:943-953. 2010.


36.            Xiao, J§., Fang, D. D.§,  Bhatti,  M., Hendrix B., and Cantrell, R. G. A new SNP haplotype associated with a gene resistant to bacterial blight (Race 18) in upland cotton (Gossypium hirsutum L.). Molecular Breeding 25:593-602. 2010. (§ co-first author)





35.            Xiao, J., Wu, K., Fang, D.D., Stelly, D. M., Yu, J,  and Cantrell, R.G.  New DNA markers for use in cotton (Gossypium spp.) improvement. Journal of Cotton Science 13:75-157. 2009.


34.            Romano, G. B., Sacks, E. J., Stetina, S. R., Robinson, A. F., Fang, D. D., Gutierrez, O. A., and Scheffler, J. A.  Identification and genomic location of a reniform nematode (Rotylenchulus reniformis) resistance locus (Renari) introgressed from Gossypium aridum into upland cotton (G. hirsutum). Theoretical and Applied Genetics 120:139-150. 2009.





33.            Blenda A, Scheffler, J., Scheffler, B., Palmer, M., Lacape, J. M., Yu, J. Z., Jesudurai, C., Jung, S., Muthukumar, S., Yellambalase, P., Ficklin, S., Staton, M., Eshelman, R., Ulloa, M., Saha, S., Burr, B., Liu, S., Zhang, T. Z., Fang Deqiu, Pepper, A., Kumpatla, S., Jacobs, J., Tomkins, J., Cantrell, R. G. and Main, D. CMD: A cotton microsatellite database resource for Gossypium genomics. BMC Genomics 7:131. 2006.





32.            Roose, M. L., Fang Deqiu, Cheng, F. S., Tayyar, R. I., Federici, C. T. and Kupper, R. S. Mapping the Citrus genome. Acta Horticulturae 535:25-32. 2000.





31.            Fang Deqiu and Roose, M. L. A novel gene conferring citrus tristeza virus resistance in Citrus maxima (Burm.) Merrill. HortScience 34:334-335. 1999.


30.            Fang Deqiu and Roose, M. L. Inheritance of inter-simple sequence repeat markers in citrus. Journal of Heredity 90:247-249. 1999.





29.            Fang Deqiu, Federici, C. T. and Roose, M. L. A high resolution linkage map of the citrus tristeza virus resistance gene region in Poncirus trifoliata (L.) Raf. Genetics 150:883-890. 1998.


28.            Fang Deqiu, Krueger, R. R. and Roose, M. L. Phylogenetic relationships among selected Citrus germplasm accessions revealed by inter-simple sequence repeat markers. Journal of American Society for Horticultural Science 123:612-617. 1998.


27.            Federici, C. T., Fang Deqiu, Scora, R. W. and Roose, M. L. Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis. Theoretical and Applied Genetics 96:812-822. 1998.





26.            Fang Deqiu, Roose, M. L., Krueger, R. R. and Federici, C. T.  Fingerprinting trifoliate orange germ plasm accessions with isozymes, RFLPs and inter-simple sequence repeat markers.  Theoretical and Applied Genetics 95:211-219. 1997.


25.            Fang Deqiu, Federici, C. T. and Roose, M. L.  Development of molecular markers linked to a gene controlling fruit acidity in citrus. Genome 40:841-849. 1997.


24.       Fang Deqiu and Roose, M. L. Identification of closely related citrus cultivars with inter-simple sequence repeat markers. Theoretical and Applied Genetics 95:408-417. 1997





23.            Fang Deqiu, Zhang, W. C. and Xiao, S. Y. Studies on the origin of satsuma mandarin by isozyme analysis. Journal of Fruit Science 12:16-20. 1995.


22.            Rodov, V., Ben-Yehoahua, S., Fierman, T. and Fang Deqiu. Modified humidity packaging reduces decay of harvested red bell pepper fruit.  HortScience 30:299-302. 1995.


21.            Rodov, V., Ben-Yehoshua, S., Albagli, R. and Fang Deqiu. Reducing chilling injury and decay of stored citrus fruit by hot water dips. Postharvest Biology and Technology 5:119-127. 1995.


20.            Rodov, V., Ben-Yehoshua, S., Fang Deqiu, Kim, J. J. and Ashkenazi, R. Preformed antifungal compounds of lemon fruit: citral and its relation to disease resistance. Journal of Agricultural and Food Chemistry 43:1057-1061. 1995.


19.            Ben-Yehoshua, S., Rodov, V., Fang Deqiu and Kim, J. J. Preformed antifungal compounds of citrus fruit: effect of postharvest treatments with heat and growth regulators. Journal of Agricultural and Food Chemistry 43:1062-1066. 1995.


18.            Ben-Yehoshua, S., Fang Deqiu, Rodov, V. and Fishman, S.  New developments in modified atmosphere packaging (Part II). Plasticulture 107:33-40. 1995.


17.            Ben-Yehoshua, S., Fang Deqiu, Rodov, V. and Fishman, S. New developments in modified atmosphere packaging (Part I). Plasticulture 106:29-37. 1995.





16.            Fang Deqiu, Hou, S. S., Li, X. M., Ye, H. C. and Li, G. F. Effects of nutritional factors on cell growth and shikonin derivative formation in suspension cultures of Arnebia euchroma cells. Journal of Wuhan Botanical Research 12:348-354. 1994.


15.            Fang Deqiu, Hou, S. S., Li, X. M., Ye, H. C. and Li, G. F. Effects of pH and hormones on cell growth and shikonin derivative formation in suspension cultures of Arnebia euchroma cells. Journal of Wuhan Botanical Research 12:159-164. 1994.


14.            Fang Deqiu, Zhang, W. C. and Xiao, S. Y. Isozymes and classification of Citrus species in China.  Acta Botanica Sinica 36:124-138. 1994. 


13.            Fang Deqiu and Xiao, S. Y. Antimicrobiological activity of citral and related essential oils. Natural Product Research and Development 6:75-78. 1994.


12.            Rodov, V., D’hallewin, G., Ben-Yehoshua, S., Fang Deqiu and Castia, T.  Accumulation of phytoalexins scoparone and scopoletin in citrus fruits subjected to various postharvest treatments. Acta Horticulturae 381:517-523. 1994.


11.            Rodov, R., Ben-Yehoshua, S., Albagli, R. and Fang Deqiu. Hot water dip as a means to improve keeping qualities of citrus fruits, as compared to long-term heat treatment (curing). Hassadeh 74:1084-1087. 1994.





10.            Fang Deqiu, Zhang, W. C. and Xiao, S. Y. Studies on taxonomy and  evolution of Citrus and its related genera by isozyme analysis. Acta Phytotaxonomica Sinica 31:329-352. 1993.


9.               Fang Deqiu. New methods in citrus taxonomy. Journal of Fruit Science 10:29-33. 1993


8.               Fang Deqiu. Citrus taxonomy--- past, present and future. Journal of Wuhan Botanical Research 11:375-382. 1993.


7.               Fang Deqiu. Inter- and intrageneric relationships of Poncirus polyandra: investigation by leaf isozymes. Journal of Wuhan Botanical Research 11:34-40. 1993.





6.               Fang Deqiu and Zhang, W. C. Studies on the taxonomy and evolution of mandarins in China by isozyme analysis. Journal of Wuhan Botanical Research 10:305-312. 1992.


5.               Fang Deqiu and Zhang, W. C. Comparisons among the application of four cluster analysis methods in the chemotaxonomy of citrus species. Journal of Huazhong Agricultural University 11:256-262. 1992.





4.               Fang Deqiu, Xiao, S. Y. and Zhang, W. C. Studies on developmental and organic specificities of citrus isozymes. Zhejiang Citrus (4): 4-6. 1991.





3.               Zhang, H. Z., Peng, S. A., Cai, L. H. and Fang Deqiu. The germplasm resources of the genus Eriobotrya with special reference to the origin of E. japonica Lindl. Acta Horticulturae Sinica 17:5-12.  1990.





2.               Fang Deqiu and Zhang, H. Z. Peroxidase isozymes in the genus Eriobotrya. Journal of Huazhong Agricultural University 8:144-150. 1989.





1.         Zhou, Z. D., Zhang, P. T., Fang Deqiu, Zheng, Y. F. and Huang, J. C. Investigation on Vitis in Meiling area, Nanchang suburbs of Jiangxi province. Journal of Jiangxi Agricultural University 8(2):37-42. 1986.

Last Modified: 12/23/2013
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